Difference between revisions of "TSS:Hg 105224.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=119 |entrez_id=84665 |gc_percent=0.457711 |gene_alias=CMD1DD|CMH22|MYOP|RCM4 |gene_description=myopalladin |gene_name=MYPN |gen...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CMH22= | ||
| + | |MYOP= | ||
| + | |RCM4= | ||
| + | |all_trans=BC142609:4 AL832002:-38 AL834247:-38 BX647637:-47 ENST00000373675.3:-52 uc001jnp.2:-52 AK027343:-52 BC144333:114 BC144334:114 ENST00000613327.4:-115 NM_032578:-115 NR_045663:-115 NM_001256268:-115 uc010qit.4:-115 ENST00000358913.9:-311 uc001jno.5:-311 AF328296:-311 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=4 | ||
|distance_to_tss=119 | |distance_to_tss=119 | ||
| + | |end=68109557 | ||
|entrez_id=84665 | |entrez_id=84665 | ||
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
|gene_alias=CMD1DD|CMH22|MYOP|RCM4 | |gene_alias=CMD1DD|CMH22|MYOP|RCM4 | ||
|gene_description=myopalladin | |gene_description=myopalladin | ||
| − | |gene_name=MYPN | + | |gene_id=84665 |
| + | |gene_name=myopalladin | ||
| + | |gene_source=HGNC:23246 | ||
| + | |gene_symbol=MYPN | ||
| + | |gene_synonyms=MYOP | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23246 | ||
|nearest_ensembl=ENSG00000138347 | |nearest_ensembl=ENSG00000138347 | ||
|nearest_promoter_id=NM_001256268 | |nearest_promoter_id=NM_001256268 | ||
|nearest_refseq=NM_032578 | |nearest_refseq=NM_032578 | ||
|nearest_unigene=Hs.55205 | |nearest_unigene=Hs.55205 | ||
| + | |num_trans=17 | ||
| + | |species=human | ||
| + | |start=68109547 | ||
| + | |strand=+ | ||
| + | |transcript_name=BC142609 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105224.1 | |tss_id=hg_105224.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A5PKT7 | ||
}} | }} | ||
Revision as of 21:26, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC142609 |
|---|---|
| Distance: | 4 |
| Num_trans: | 17 |
| All_trans: | BC142609:4 AL832002:-38 AL834247:-38 BX647637:-47 ENST00000373675.3:-52 uc001jnp.2:-52 AK027343:-52 BC144333:114 BC144334:114 ENST00000613327.4:-115 NM_032578:-115 NR_045663:-115 NM_001256268:-115 uc010qit.4:-115 ENST00000358913.9:-311 uc001jno.5:-311 AF328296:-311 |
TATA-Box annotation
| Distance to TSS: | 119 |
|---|---|
| Nearest PromoterID: | NM_001256268 |
| Entrez ID: | 84665 |
| Nearest Unigene: | Hs.55205 |
| Nearest Refseq: | NM_032578 |
| Nearest Ensembl: | ENSG00000138347 |
| Gene Name: | myopalladin |
| Gene Alias: | CMD1DD |
| Gene Description: | myopalladin |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
