Difference between revisions of "TSS:Hg 105232.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.055 |distance_to_tss=-380 |entrez_id=3189 |gc_percent=0.462687 |gene_alias=2H9|HNRPH3 |gene_description=heterogeneous nuclear ribonucleoprotein H3 |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |HNRPH3= | ||
| + | |all_trans=ENST00000469172.5:-136 uc057tqg.1:-136 AK091411:-136 ENST00000461310.5:404 uc057tqh.1:404 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| + | |distance=-136 | ||
|distance_to_tss=-380 | |distance_to_tss=-380 | ||
| + | |end=68331317 | ||
|entrez_id=3189 | |entrez_id=3189 | ||
|gc_percent=0.462687 | |gc_percent=0.462687 | ||
|gene_alias=2H9|HNRPH3 | |gene_alias=2H9|HNRPH3 | ||
|gene_description=heterogeneous nuclear ribonucleoprotein H3 | |gene_description=heterogeneous nuclear ribonucleoprotein H3 | ||
| − | |gene_name=HNRNPH3 | + | |gene_id=3189 |
| + | |gene_name=heterogeneous nuclear ribonucleoprotein H3 | ||
| + | |gene_source=HGNC:5043 | ||
| + | |gene_symbol=HNRNPH3 | ||
| + | |gene_synonyms=2H9 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:5043 | ||
|nearest_ensembl=ENSG00000096746 | |nearest_ensembl=ENSG00000096746 | ||
|nearest_promoter_id=NM_001322438 | |nearest_promoter_id=NM_001322438 | ||
|nearest_refseq=NM_012207 | |nearest_refseq=NM_012207 | ||
|nearest_unigene=Hs.643472 | |nearest_unigene=Hs.643472 | ||
| + | |num_trans=5 | ||
| + | |species=human | ||
| + | |start=68331309 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000469172.5 uc057tqg.1 AK091411 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105232.1 | |tss_id=hg_105232.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:26, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000469172.5 uc057tqg.1 AK091411 |
|---|---|
| Distance: | -136 |
| Num_trans: | 5 |
| All_trans: | ENST00000469172.5:-136 uc057tqg.1:-136 AK091411:-136 ENST00000461310.5:404 uc057tqh.1:404 |
TATA-Box annotation
| Distance to TSS: | -380 |
|---|---|
| Nearest PromoterID: | NM_001322438 |
| Entrez ID: | 3189 |
| Nearest Unigene: | Hs.643472 |
| Nearest Refseq: | NM_012207 |
| Nearest Ensembl: | ENSG00000096746 |
| Gene Name: | heterogeneous nuclear ribonucleoprotein H3 |
| Gene Alias: | 2H9 |
| Gene Description: | heterogeneous nuclear ribonucleoprotein H3 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
