Difference between revisions of "TSS:Hg 105278.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.125 |distance_to_tss=-22 |entrez_id=9188 |gc_percent=0.731343 |gene_alias=GUA|GURDB|RH-II/GU|RH-II/GuA |gene_description=DExD-box helicase 21 |gene_...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |GURDB= | ||
| + | |RH-II/GU= | ||
| + | |RH-II/GuA= | ||
| + | |all_trans=ENST00000620315.1:9 NM_001256910:9 uc001jow.3:9 CR749598:9 CU675917:-180 AB527408:-180 KJ892707:-180 BC004182:-213 BC017228:-213 BC008071:-221 AK315585:-233 U41387:-234 BC009432:-236 BX648405:241 ENST00000354185.8:-278 uc001jov.3:-278 BC104671:-278 NM_004728:-283 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| + | |distance=9 | ||
|distance_to_tss=-22 | |distance_to_tss=-22 | ||
| + | |end=68956431 | ||
|entrez_id=9188 | |entrez_id=9188 | ||
|gc_percent=0.731343 | |gc_percent=0.731343 | ||
|gene_alias=GUA|GURDB|RH-II/GU|RH-II/GuA | |gene_alias=GUA|GURDB|RH-II/GU|RH-II/GuA | ||
|gene_description=DExD-box helicase 21 | |gene_description=DExD-box helicase 21 | ||
| − | |gene_name=DDX21 | + | |gene_id=9188 |
| + | |gene_name=DEAD-box helicase 21 | ||
| + | |gene_source=HGNC:2744 | ||
| + | |gene_symbol=DDX21 | ||
| + | |gene_synonyms=GURDB RH-II/GU | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:2744 | ||
|nearest_ensembl=ENSG00000165732 | |nearest_ensembl=ENSG00000165732 | ||
|nearest_promoter_id=NM_001256910 | |nearest_promoter_id=NM_001256910 | ||
|nearest_refseq=NM_004728 | |nearest_refseq=NM_004728 | ||
|nearest_unigene=Hs.223141 | |nearest_unigene=Hs.223141 | ||
| + | |num_trans=18 | ||
| + | |species=human | ||
| + | |start=68956405 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000620315.1 NM_001256910 uc001jow.3 CR749598 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105278.1 | |tss_id=hg_105278.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q9NR30 | ||
}} | }} | ||
Revision as of 21:28, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000620315.1 NM_001256910 uc001jow.3 CR749598 |
|---|---|
| Distance: | 9 |
| Num_trans: | 18 |
| All_trans: | ENST00000620315.1:9 NM_001256910:9 uc001jow.3:9 CR749598:9 CU675917:-180 AB527408:-180 KJ892707:-180 BC004182:-213 BC017228:-213 BC008071:-221 AK315585:-233 U41387:-234 BC009432:-236 BX648405:241 ENST00000354185.8:-278 uc001jov.3:-278 BC104671:-278 NM_004728:-283 |
TATA-Box annotation
| Distance to TSS: | -22 |
|---|---|
| Nearest PromoterID: | NM_001256910 |
| Entrez ID: | 9188 |
| Nearest Unigene: | Hs.223141 |
| Nearest Refseq: | NM_004728 |
| Nearest Ensembl: | ENSG00000165732 |
| Gene Name: | DEAD-box helicase 21 |
| Gene Alias: | GUA |
| Gene Description: | DExD-box helicase 21 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
