Difference between revisions of "TSS:Hg 105279.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.075 |distance_to_tss=213 |entrez_id=9188 |gc_percent=0.616915 |gene_alias=GUA|GURDB|RH-II/GU|RH-II/GuA |gene_description=DExD-box helicase 21 |gene_...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |GURDB= | ||
| + | |RH-II/GU= | ||
| + | |RH-II/GuA= | ||
| + | |all_trans=BX648405:0 ENST00000620315.1:-186 NM_001256910:-186 uc001jow.3:-186 CR749598:-186 CU675917:-400 AB527408:-400 KJ892707:-400 BC004182:-433 BC017228:-433 BC008071:-441 AK315585:-453 U41387:-454 BC009432:-456 ENST00000354185.8:-498 uc001jov.3:-498 BC104671:-498 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| + | |distance=0 | ||
|distance_to_tss=213 | |distance_to_tss=213 | ||
| + | |end=68956680 | ||
|entrez_id=9188 | |entrez_id=9188 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
|gene_alias=GUA|GURDB|RH-II/GU|RH-II/GuA | |gene_alias=GUA|GURDB|RH-II/GU|RH-II/GuA | ||
|gene_description=DExD-box helicase 21 | |gene_description=DExD-box helicase 21 | ||
| − | |gene_name=DDX21 | + | |gene_id=9188 |
| + | |gene_name=DEAD-box helicase 21 | ||
| + | |gene_source=HGNC:2744 | ||
| + | |gene_symbol=DDX21 | ||
| + | |gene_synonyms=GURDB RH-II/GU | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:2744 | ||
|nearest_ensembl=ENSG00000165732 | |nearest_ensembl=ENSG00000165732 | ||
|nearest_promoter_id=NM_001256910 | |nearest_promoter_id=NM_001256910 | ||
|nearest_refseq=NM_004728 | |nearest_refseq=NM_004728 | ||
|nearest_unigene=Hs.223141 | |nearest_unigene=Hs.223141 | ||
| + | |num_trans=17 | ||
| + | |species=human | ||
| + | |start=68956625 | ||
| + | |strand=+ | ||
| + | |transcript_name=BX648405 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105279.1 | |tss_id=hg_105279.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:28, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BX648405 |
|---|---|
| Distance: | 0 |
| Num_trans: | 17 |
| All_trans: | BX648405:0 ENST00000620315.1:-186 NM_001256910:-186 uc001jow.3:-186 CR749598:-186 CU675917:-400 AB527408:-400 KJ892707:-400 BC004182:-433 BC017228:-433 BC008071:-441 AK315585:-453 U41387:-454 BC009432:-456 ENST00000354185.8:-498 uc001jov.3:-498 BC104671:-498 |
TATA-Box annotation
| Distance to TSS: | 213 |
|---|---|
| Nearest PromoterID: | NM_001256910 |
| Entrez ID: | 9188 |
| Nearest Unigene: | Hs.223141 |
| Nearest Refseq: | NM_004728 |
| Nearest Ensembl: | ENSG00000165732 |
| Gene Name: | DEAD-box helicase 21 |
| Gene Alias: | GUA |
| Gene Description: | DExD-box helicase 21 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
