Difference between revisions of "TSS:Hg 105310.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.035 |distance_to_tss=9143 |entrez_id=5552 |gc_percent=0.447761 |gene_alias=PPG|PRG|PRG1 |gene_description=serglycin |gene_name=SRGN |gene_type=prote...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |PRG= | ||
| + | |PRG1= | ||
| + | |all_trans=X12765:-56 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| + | |distance=-56 | ||
|distance_to_tss=9143 | |distance_to_tss=9143 | ||
| + | |end=69097181 | ||
|entrez_id=5552 | |entrez_id=5552 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
|gene_alias=PPG|PRG|PRG1 | |gene_alias=PPG|PRG|PRG1 | ||
|gene_description=serglycin | |gene_description=serglycin | ||
| − | |gene_name=SRGN | + | |gene_id=5552 |
| + | |gene_name=serglycin | ||
| + | |gene_source=HGNC:9361 | ||
| + | |gene_symbol=SRGN | ||
| + | |gene_synonyms=PPG | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:9361 | ||
|nearest_ensembl=ENSG00000122862 | |nearest_ensembl=ENSG00000122862 | ||
|nearest_promoter_id=NM_001321054 | |nearest_promoter_id=NM_001321054 | ||
|nearest_refseq=NM_002727 | |nearest_refseq=NM_002727 | ||
|nearest_unigene=Hs.1908 | |nearest_unigene=Hs.1908 | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=69097160 | ||
| + | |strand=+ | ||
| + | |transcript_name=X12765 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105310.1 | |tss_id=hg_105310.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:30, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | X12765 |
|---|---|
| Distance: | -56 |
| Num_trans: | 1 |
| All_trans: | X12765:-56 |
TATA-Box annotation
| Distance to TSS: | 9143 |
|---|---|
| Nearest PromoterID: | NM_001321054 |
| Entrez ID: | 5552 |
| Nearest Unigene: | Hs.1908 |
| Nearest Refseq: | NM_002727 |
| Nearest Ensembl: | ENSG00000122862 |
| Gene Name: | serglycin |
| Gene Alias: | PPG |
| Gene Description: | serglycin |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
