Difference between revisions of "TSS:Hg 105329.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.04 |distance_to_tss=-323 |entrez_id=6832 |gc_percent=0.462687 |gene_alias=SUV3 |gene_description=Suv3 like RNA helicase |gene_name=SUPV3L1 |gene_typ...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=NM_001301683:322 NM_003171:322 ENST00000359655.8:350 uc001jpe.2:350 BC036112:355 ENST00000471069.5:368 uc057tsx.1:368 AK299670:368 AK290416:368 ENST00000483572.5:399 uc057tsy.1:399 ENST00000422378.1:406 uc057tsz.1:406 CU690300:410 DQ894183:410 AF042169:410 DQ891004:410 KJ892230:410 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| + | |distance=322 | ||
|distance_to_tss=-323 | |distance_to_tss=-323 | ||
| + | |end=69179882 | ||
|entrez_id=6832 | |entrez_id=6832 | ||
|gc_percent=0.462687 | |gc_percent=0.462687 | ||
|gene_alias=SUV3 | |gene_alias=SUV3 | ||
|gene_description=Suv3 like RNA helicase | |gene_description=Suv3 like RNA helicase | ||
| − | |gene_name=SUPV3L1 | + | |gene_id=6832 |
| + | |gene_name=Suv3 like RNA helicase | ||
| + | |gene_source=HGNC:11471 | ||
| + | |gene_symbol=SUPV3L1 | ||
| + | |gene_synonyms=SUV3 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:11471 | ||
|nearest_ensembl=ENSG00000156502 | |nearest_ensembl=ENSG00000156502 | ||
|nearest_promoter_id=NM_001301683 | |nearest_promoter_id=NM_001301683 | ||
|nearest_refseq=NM_003171 | |nearest_refseq=NM_003171 | ||
|nearest_unigene=Hs.106469 | |nearest_unigene=Hs.106469 | ||
| + | |num_trans=18 | ||
| + | |species=human | ||
| + | |start=69179879 | ||
| + | |strand=+ | ||
| + | |transcript_name=NM_001301683 NM_003171 | ||
| + | |tss_classification=no | ||
|tss_id=hg_105329.1 | |tss_id=hg_105329.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q8IYB8 | ||
}} | }} | ||
Revision as of 21:31, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001301683 NM_003171 |
|---|---|
| Distance: | 322 |
| Num_trans: | 18 |
| All_trans: | NM_001301683:322 NM_003171:322 ENST00000359655.8:350 uc001jpe.2:350 BC036112:355 ENST00000471069.5:368 uc057tsx.1:368 AK299670:368 AK290416:368 ENST00000483572.5:399 uc057tsy.1:399 ENST00000422378.1:406 uc057tsz.1:406 CU690300:410 DQ894183:410 AF042169:410 DQ891004:410 KJ892230:410 |
TATA-Box annotation
| Distance to TSS: | -323 |
|---|---|
| Nearest PromoterID: | NM_001301683 |
| Entrez ID: | 6832 |
| Nearest Unigene: | Hs.106469 |
| Nearest Refseq: | NM_003171 |
| Nearest Ensembl: | ENSG00000156502 |
| Gene Name: | Suv3 like RNA helicase |
| Gene Alias: | SUV3 |
| Gene Description: | Suv3 like RNA helicase |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
