Difference between revisions of "TSS:Hg 10534.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=-19586 |entrez_id=79363 |gc_percent=0.522388 |gene_alias=C1orf89 |gene_description=REM2 and RAB like small GTPase 1 |gene_name=R...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=BC006174:95 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| + | |distance=95 | ||
|distance_to_tss=-19586 | |distance_to_tss=-19586 | ||
| + | |end=16256756 | ||
|entrez_id=79363 | |entrez_id=79363 | ||
|gc_percent=0.522388 | |gc_percent=0.522388 | ||
|gene_alias=C1orf89 | |gene_alias=C1orf89 | ||
|gene_description=REM2 and RAB like small GTPase 1 | |gene_description=REM2 and RAB like small GTPase 1 | ||
| − | |gene_name= | + | |gene_id=54455 |
| + | |gene_name=F-box protein 42 | ||
| + | |gene_source=HGNC:29249 | ||
| + | |gene_symbol=FBXO42 | ||
| + | |gene_synonyms=Fbx42 KIAA1332 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:29249 | ||
|nearest_ensembl=ENSG00000132881 | |nearest_ensembl=ENSG00000132881 | ||
|nearest_promoter_id=NM_030907 | |nearest_promoter_id=NM_030907 | ||
|nearest_refseq=NM_030907 | |nearest_refseq=NM_030907 | ||
|nearest_unigene=Hs.546430 | |nearest_unigene=Hs.546430 | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=16256743 | ||
| + | |strand=- | ||
| + | |transcript_name=BC006174 | ||
| + | |tss_classification=no | ||
|tss_id=hg_10534.1 | |tss_id=hg_10534.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:31, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC006174 |
|---|---|
| Distance: | 95 |
| Num_trans: | 1 |
| All_trans: | BC006174:95 |
TATA-Box annotation
| Distance to TSS: | -19586 |
|---|---|
| Nearest PromoterID: | NM_030907 |
| Entrez ID: | 79363 |
| Nearest Unigene: | Hs.546430 |
| Nearest Refseq: | NM_030907 |
| Nearest Ensembl: | ENSG00000132881 |
| Gene Name: | F-box protein 42 |
| Gene Alias: | C1orf89 |
| Gene Description: | REM2 and RAB like small GTPase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.522388 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
