Difference between revisions of "TSS:Hg 105342.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=38 |entrez_id=3098 |gc_percent=0.432836 |gene_alias=HK|HK1-ta|HK1-tb|HK1-tc|HKD|HKI|HMSNR|HXK1|hexokinase |gene_description=hex...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |HK1-ta= | ||
| + | |HK1-tb= | ||
| + | |HK1-tc= | ||
| + | |HKD= | ||
| + | |HKI= | ||
| + | |HMSNR= | ||
| + | |HXK1= | ||
| + | |all_trans=ENST00000476368.5:-10 uc057ttm.1:-10 ENST00000479594.5:-32 ENST00000483077.5:-32 uc057ttk.1:-32 uc057ttl.1:-32 AK128226:-32 ENST00000464803.5:-37 ENST00000480047.5:-37 ENST00000360289.6:-37 ENST00000448642.6:-37 NM_033500:-37 NM_033498:-37 NM_033497:-37 uc057tti.1:-37 uc057ttj.1:-37 uc001jpg.5:-37 uc001jph.5:-37 U38226:-37 U38227:-37 U38228:-37 ENST00000450646.5:-53 uc057tth.1:-53 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| + | |distance=-10 | ||
|distance_to_tss=38 | |distance_to_tss=38 | ||
| + | |end=69270040 | ||
|entrez_id=3098 | |entrez_id=3098 | ||
|gc_percent=0.432836 | |gc_percent=0.432836 | ||
|gene_alias=HK|HK1-ta|HK1-tb|HK1-tc|HKD|HKI|HMSNR|HXK1|hexokinase | |gene_alias=HK|HK1-ta|HK1-tb|HK1-tc|HKD|HKI|HMSNR|HXK1|hexokinase | ||
|gene_description=hexokinase 1 | |gene_description=hexokinase 1 | ||
| − | |gene_name=HK1 | + | |gene_id=3098 |
| + | |gene_name=hexokinase 1 | ||
| + | |gene_source=HGNC:4922 | ||
| + | |gene_symbol=HK1 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hexokinase= | ||
| + | |hgnc_mgi_id=HGNC:4922 | ||
|nearest_ensembl=ENSG00000156515 | |nearest_ensembl=ENSG00000156515 | ||
|nearest_promoter_id=NM_001322364 | |nearest_promoter_id=NM_001322364 | ||
|nearest_refseq=NM_000188 | |nearest_refseq=NM_000188 | ||
|nearest_unigene=Hs.370365 | |nearest_unigene=Hs.370365 | ||
| + | |num_trans=23 | ||
| + | |species=human | ||
| + | |start=69270036 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000476368.5 uc057ttm.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105342.1 | |tss_id=hg_105342.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:31, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000476368.5 uc057ttm.1 |
|---|---|
| Distance: | -10 |
| Num_trans: | 23 |
| All_trans: | ENST00000476368.5:-10 uc057ttm.1:-10 ENST00000479594.5:-32 ENST00000483077.5:-32 uc057ttk.1:-32 uc057ttl.1:-32 AK128226:-32 ENST00000464803.5:-37 ENST00000480047.5:-37 ENST00000360289.6:-37 ENST00000448642.6:-37 NM_033500:-37 NM_033498:-37 NM_033497:-37 uc057tti.1:-37 uc057ttj.1:-37 uc001jpg.5:-37 uc001jph.5:-37 U38226:-37 U38227:-37 U38228:-37 ENST00000450646.5:-53 uc057tth.1:-53 |
TATA-Box annotation
| Distance to TSS: | 38 |
|---|---|
| Nearest PromoterID: | NM_001322364 |
| Entrez ID: | 3098 |
| Nearest Unigene: | Hs.370365 |
| Nearest Refseq: | NM_000188 |
| Nearest Ensembl: | ENSG00000156515 |
| Gene Name: | hexokinase 1 |
| Gene Alias: | HK |
| Gene Description: | hexokinase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.432836 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
