Difference between revisions of "TSS:Hg 105380.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=6878 |entrez_id=56681 |gc_percent=0.447761 |gene_alias=SAR1|SARA1|Sara|masra2 |gene_description=secretion associated Ras relate...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |SARA1= | ||
| + | |Sara= | ||
| + | |all_trans=ENST00000428512.1:14 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=14 | ||
|distance_to_tss=6878 | |distance_to_tss=6878 | ||
| + | |end=70163671 | ||
|entrez_id=56681 | |entrez_id=56681 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
|gene_alias=SAR1|SARA1|Sara|masra2 | |gene_alias=SAR1|SARA1|Sara|masra2 | ||
|gene_description=secretion associated Ras related GTPase 1A | |gene_description=secretion associated Ras related GTPase 1A | ||
| − | |gene_name= | + | |gene_id= |
| + | |gene_name=calmodulin 2 pseudogene 2 | ||
| + | |gene_source=HGNC:1447 | ||
| + | |gene_symbol=CALM2P2 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:1447 | ||
| + | |masra2= | ||
|nearest_ensembl=ENSG00000079332 | |nearest_ensembl=ENSG00000079332 | ||
|nearest_promoter_id=NM_020150 | |nearest_promoter_id=NM_020150 | ||
|nearest_refseq=NM_020150 | |nearest_refseq=NM_020150 | ||
|nearest_unigene=Hs.499960 | |nearest_unigene=Hs.499960 | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=70163630 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000428512.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_105380.1 | |tss_id=hg_105380.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:33, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000428512.1 |
|---|---|
| Distance: | 14 |
| Num_trans: | 1 |
| All_trans: | ENST00000428512.1:14 |
TATA-Box annotation
| Distance to TSS: | 6878 |
|---|---|
| Nearest PromoterID: | NM_020150 |
| Entrez ID: | 56681 |
| Nearest Unigene: | Hs.499960 |
| Nearest Refseq: | NM_020150 |
| Nearest Ensembl: | ENSG00000079332 |
| Gene Name: | calmodulin 2 pseudogene 2 |
| Gene Alias: | SAR1 |
| Gene Description: | secretion associated Ras related GTPase 1A |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
