Difference between revisions of "TSS:Hg 105381.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.135 |distance_to_tss=41 |entrez_id=1979 |gc_percent=0.741294 |gene_alias=4EBP2|PHASII |gene_description=eukaryotic translation initiation factor 4E...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |PHASII= | ||
| + | |all_trans=AK313724:0 BC050633:3 NM_004096:-25 ENST00000373218.4:216 uc001jrb.4:216 BC005057:216 AB385553:236 DQ893105:237 DQ896377:237 CU674981:238 KJ891097:238 CR542240:239 BT007317:239 L36056:239 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
| + | |distance=0 | ||
|distance_to_tss=41 | |distance_to_tss=41 | ||
| + | |end=70404163 | ||
|entrez_id=1979 | |entrez_id=1979 | ||
|gc_percent=0.741294 | |gc_percent=0.741294 | ||
|gene_alias=4EBP2|PHASII | |gene_alias=4EBP2|PHASII | ||
|gene_description=eukaryotic translation initiation factor 4E binding protein 2 | |gene_description=eukaryotic translation initiation factor 4E binding protein 2 | ||
| − | |gene_name=EIF4EBP2 | + | |gene_id=1979 |
| + | |gene_name=eukaryotic translation initiation factor 4E binding protein 2 | ||
| + | |gene_source=HGNC:3289 | ||
| + | |gene_symbol=EIF4EBP2 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:3289 | ||
|nearest_ensembl=ENSG00000148730 | |nearest_ensembl=ENSG00000148730 | ||
|nearest_promoter_id=NM_004096 | |nearest_promoter_id=NM_004096 | ||
|nearest_refseq=NM_004096 | |nearest_refseq=NM_004096 | ||
|nearest_unigene=Hs.621200 | |nearest_unigene=Hs.621200 | ||
| + | |num_trans=14 | ||
| + | |species=human | ||
| + | |start=70404129 | ||
| + | |strand=+ | ||
| + | |transcript_name=AK313724 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105381.1 | |tss_id=hg_105381.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B2R9B9 | ||
}} | }} | ||
Revision as of 21:33, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK313724 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | AK313724:0 BC050633:3 NM_004096:-25 ENST00000373218.4:216 uc001jrb.4:216 BC005057:216 AB385553:236 DQ893105:237 DQ896377:237 CU674981:238 KJ891097:238 CR542240:239 BT007317:239 L36056:239 |
TATA-Box annotation
| Distance to TSS: | 41 |
|---|---|
| Nearest PromoterID: | NM_004096 |
| Entrez ID: | 1979 |
| Nearest Unigene: | Hs.621200 |
| Nearest Refseq: | NM_004096 |
| Nearest Ensembl: | ENSG00000148730 |
| Gene Name: | eukaryotic translation initiation factor 4E binding protein 2 |
| Gene Alias: | 4EBP2 |
| Gene Description: | eukaryotic translation initiation factor 4E binding protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.741294 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
