Difference between revisions of "TSS:Hg 105438.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=-5613 |entrez_id=64115 |gc_percent=0.492537 |gene_alias=B7-H5|B7H5|C10orf54|DD1alpha|GI24|PD-1H|PP2135|SISP1|VISTA |gene_descri...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |B7H5= | ||
| + | |C10orf54= | ||
| + | |DD1alpha= | ||
| + | |GI24= | ||
| + | |PD-1H= | ||
| + | |PP2135= | ||
| + | |SISP1= | ||
| + | |VISTA= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| + | |distance= | ||
|distance_to_tss=-5613 | |distance_to_tss=-5613 | ||
| + | |end=71779197 | ||
|entrez_id=64115 | |entrez_id=64115 | ||
|gc_percent=0.492537 | |gc_percent=0.492537 | ||
| Line 12: | Line 23: | ||
|nearest_refseq=NM_022153 | |nearest_refseq=NM_022153 | ||
|nearest_unigene=Hs.47382 | |nearest_unigene=Hs.47382 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=71779189 | ||
| + | |strand=+ | ||
|tata_box="-82(TAGCTTAAAAGC,-,0.00),-80(GCTTAAAAGCCC,+,0.00)" | |tata_box="-82(TAGCTTAAAAGC,-,0.00),-80(GCTTAAAAGCCC,+,0.00)" | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_105438.1 | |tss_id=hg_105438.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 21:35, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -5613 |
|---|---|
| Nearest PromoterID: | NM_022153 |
| Entrez ID: | 64115 |
| Nearest Unigene: | Hs.47382 |
| Nearest Refseq: | NM_022153 |
| Nearest Ensembl: | ENSG00000107738 |
| Gene Name: | VSIR |
| Gene Alias: | B7-H5 |
| Gene Description: | V-set immunoregulatory receptor |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.492537 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-82(TAGCTTAAAAGC,-,0.00),-80(GCTTAAAAGCCC,+,0.00)" |
