Difference between revisions of "TSS:Hg 105463.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=-26732 |entrez_id=5660 |gc_percent=0.487562 |gene_alias=GLBA|SAP1 |gene_description=prosaposin |gene_name=PSAP |gene_type=prote...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |SAP1= | ||
| + | |all_trans=ENST00000441348.1:239 uc057twy.1:239 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=239 | ||
|distance_to_tss=-26732 | |distance_to_tss=-26732 | ||
| + | |end=71878117 | ||
|entrez_id=5660 | |entrez_id=5660 | ||
|gc_percent=0.487562 | |gc_percent=0.487562 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_002778 | |nearest_refseq=NM_002778 | ||
|nearest_unigene=Hs.523004 | |nearest_unigene=Hs.523004 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=71878097 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000441348.1 uc057twy.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_105463.1 | |tss_id=hg_105463.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 21:36, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000441348.1 uc057twy.1 |
|---|---|
| Distance: | 239 |
| Num_trans: | 2 |
| All_trans: | ENST00000441348.1:239 uc057twy.1:239 |
TATA-Box annotation
| Distance to TSS: | -26732 |
|---|---|
| Nearest PromoterID: | NM_001042466 |
| Entrez ID: | 5660 |
| Nearest Unigene: | Hs.523004 |
| Nearest Refseq: | NM_002778 |
| Nearest Ensembl: | ENSG00000197746 |
| Gene Name: | PSAP |
| Gene Alias: | GLBA |
| Gene Description: | prosaposin |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.487562 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
