Difference between revisions of "TSS:Hg 105492.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.085 |distance_to_tss=88 |entrez_id=54541 |gc_percent=0.656716 |gene_alias=Dig2|REDD-1|REDD1 |gene_description=DNA damage inducible transcript 4 |gen...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |REDD-1= | ||
| + | |REDD1= | ||
| + | |all_trans=AY090097:-1 ENST00000471240.1:8 uc057tyb.1:8 BC000708:11 BC015236:-58 AF335324:-67 BC007714:-72 ENST00000473155.1:-78 uc057tya.1:-78 AK000507:-79 ENST00000307365.3:-83 uc001jsx.2:-83 AL136668:-83 NM_019058:-84 AM392607:202 DQ890984:202 DQ894159:202 AB587474:204 KJ894039:205 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| + | |distance=-1 | ||
|distance_to_tss=88 | |distance_to_tss=88 | ||
| + | |end=72274011 | ||
|entrez_id=54541 | |entrez_id=54541 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
|gene_alias=Dig2|REDD-1|REDD1 | |gene_alias=Dig2|REDD-1|REDD1 | ||
|gene_description=DNA damage inducible transcript 4 | |gene_description=DNA damage inducible transcript 4 | ||
| − | |gene_name=DDIT4 | + | |gene_id=54541 |
| + | |gene_name=DNA damage inducible transcript 4 | ||
| + | |gene_source=HGNC:24944 | ||
| + | |gene_symbol=DDIT4 | ||
| + | |gene_synonyms=Dig2 FLJ20500 REDD-1 REDD1 RTP801 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:24944 | ||
|nearest_ensembl=ENSG00000168209 | |nearest_ensembl=ENSG00000168209 | ||
|nearest_promoter_id=NM_019058 | |nearest_promoter_id=NM_019058 | ||
|nearest_refseq=NM_019058 | |nearest_refseq=NM_019058 | ||
|nearest_unigene=Hs.744875 | |nearest_unigene=Hs.744875 | ||
| + | |num_trans=19 | ||
| + | |species=human | ||
| + | |start=72274002 | ||
| + | |strand=+ | ||
| + | |transcript_name=AY090097 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105492.1 | |tss_id=hg_105492.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:38, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AY090097 |
|---|---|
| Distance: | -1 |
| Num_trans: | 19 |
| All_trans: | AY090097:-1 ENST00000471240.1:8 uc057tyb.1:8 BC000708:11 BC015236:-58 AF335324:-67 BC007714:-72 ENST00000473155.1:-78 uc057tya.1:-78 AK000507:-79 ENST00000307365.3:-83 uc001jsx.2:-83 AL136668:-83 NM_019058:-84 AM392607:202 DQ890984:202 DQ894159:202 AB587474:204 KJ894039:205 |
TATA-Box annotation
| Distance to TSS: | 88 |
|---|---|
| Nearest PromoterID: | NM_019058 |
| Entrez ID: | 54541 |
| Nearest Unigene: | Hs.744875 |
| Nearest Refseq: | NM_019058 |
| Nearest Ensembl: | ENSG00000168209 |
| Gene Name: | DNA damage inducible transcript 4 |
| Gene Alias: | Dig2 |
| Gene Description: | DNA damage inducible transcript 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
