Difference between revisions of "TSS:Hg 105515.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=24 |entrez_id=170392 |gc_percent=0.422886 |gene_alias=LZP |gene_description=oncoprotein induced transcript 3 |gene_name=OIT3 |gene_...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000334011.9:0 ENST00000622652.1:0 uc001jte.2:0 uc057tze.1:0 AK096435:0 BC126440:0 AY358339:16 NM_152635:-17 NR_130125:-17 AY013707:138 KJ903964:212 HQ258178:212 | ||
| + | |chr=chr10 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| + | |distance=0 | ||
|distance_to_tss=24 | |distance_to_tss=24 | ||
| + | |end=72893587 | ||
|entrez_id=170392 | |entrez_id=170392 | ||
|gc_percent=0.422886 | |gc_percent=0.422886 | ||
|gene_alias=LZP | |gene_alias=LZP | ||
|gene_description=oncoprotein induced transcript 3 | |gene_description=oncoprotein induced transcript 3 | ||
| − | |gene_name=OIT3 | + | |gene_id=170392 |
| + | |gene_name=oncoprotein induced transcript 3 | ||
| + | |gene_source=HGNC:29953 | ||
| + | |gene_symbol=OIT3 | ||
| + | |gene_synonyms=FLJ39116 LZP | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:29953 | ||
|nearest_ensembl=ENSG00000138315 | |nearest_ensembl=ENSG00000138315 | ||
|nearest_promoter_id=NR_130125 | |nearest_promoter_id=NR_130125 | ||
|nearest_refseq=NM_152635 | |nearest_refseq=NM_152635 | ||
|nearest_unigene=Hs.8366 | |nearest_unigene=Hs.8366 | ||
| + | |num_trans=12 | ||
| + | |species=human | ||
| + | |start=72893572 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000334011.9 ENST00000622652.1 uc001jte.2 uc057tze.1 AK096435 BC126440 | ||
| + | |tss_classification=no | ||
|tss_id=hg_105515.1 | |tss_id=hg_105515.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q8WWZ8 | ||
}} | }} | ||
Revision as of 21:39, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000334011.9 ENST00000622652.1 uc001jte.2 uc057tze.1 AK096435 BC126440 |
|---|---|
| Distance: | 0 |
| Num_trans: | 12 |
| All_trans: | ENST00000334011.9:0 ENST00000622652.1:0 uc001jte.2:0 uc057tze.1:0 AK096435:0 BC126440:0 AY358339:16 NM_152635:-17 NR_130125:-17 AY013707:138 KJ903964:212 HQ258178:212 |
TATA-Box annotation
| Distance to TSS: | 24 |
|---|---|
| Nearest PromoterID: | NR_130125 |
| Entrez ID: | 170392 |
| Nearest Unigene: | Hs.8366 |
| Nearest Refseq: | NM_152635 |
| Nearest Ensembl: | ENSG00000138315 |
| Gene Name: | oncoprotein induced transcript 3 |
| Gene Alias: | LZP |
| Gene Description: | oncoprotein induced transcript 3 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.422886 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
