Difference between revisions of "TSS:Hg 105526.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.11 |distance_to_tss=43 |entrez_id=414245 |gc_percent=0.641791 |gene_alias=C10orf103|bA537A6.3 |gene_description=DNAJC9 antisense RNA 1 |gene_name=DN...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=NR_038373:-37 BC043233:-37 ENST00000440197.2:-44 uc021ptm.2:-44 | ||
| + | |bA537A6.3= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| + | |distance=-37 | ||
|distance_to_tss=43 | |distance_to_tss=43 | ||
| + | |end=73247417 | ||
|entrez_id=414245 | |entrez_id=414245 | ||
|gc_percent=0.641791 | |gc_percent=0.641791 | ||
|gene_alias=C10orf103|bA537A6.3 | |gene_alias=C10orf103|bA537A6.3 | ||
|gene_description=DNAJC9 antisense RNA 1 | |gene_description=DNAJC9 antisense RNA 1 | ||
| − | |gene_name=DNAJC9-AS1 | + | |gene_id=414245 |
| + | |gene_name=DNAJC9 antisense RNA 1 | ||
| + | |gene_source=HGNC:31432 | ||
| + | |gene_symbol=DNAJC9-AS1 | ||
| + | |gene_synonyms=bA537A6.3 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:31432 | ||
|nearest_ensembl=ENSG00000227540 | |nearest_ensembl=ENSG00000227540 | ||
|nearest_promoter_id=NR_038373 | |nearest_promoter_id=NR_038373 | ||
|nearest_refseq=NR_038373 | |nearest_refseq=NR_038373 | ||
|nearest_unigene=Hs.568860 | |nearest_unigene=Hs.568860 | ||
| + | |num_trans=4 | ||
| + | |species=human | ||
| + | |start=73247403 | ||
| + | |strand=+ | ||
| + | |transcript_name=NR_038373 BC043233 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105526.1 | |tss_id=hg_105526.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:39, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NR_038373 BC043233 |
|---|---|
| Distance: | -37 |
| Num_trans: | 4 |
| All_trans: | NR_038373:-37 BC043233:-37 ENST00000440197.2:-44 uc021ptm.2:-44 |
TATA-Box annotation
| Distance to TSS: | 43 |
|---|---|
| Nearest PromoterID: | NR_038373 |
| Entrez ID: | 414245 |
| Nearest Unigene: | Hs.568860 |
| Nearest Refseq: | NR_038373 |
| Nearest Ensembl: | ENSG00000227540 |
| Gene Name: | DNAJC9 antisense RNA 1 |
| Gene Alias: | C10orf103 |
| Gene Description: | DNAJC9 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.11 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
