Difference between revisions of "TSS:Hg 105545.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.17 |distance_to_tss=399 |entrez_id=170384 |gc_percent=0.741294 |gene_alias=- |gene_description=fucosyltransferase 11 |gene_name=FUT11 |gene_type=pro...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000465695.1:-77 uc057ucy.1:-77 AK095482:-77 DQ894378:-308 EU176260:-308 AK314944:-332 BC100994:-347 BC100995:-347 BC100996:-347 BC100997:-347 ENST00000394790.2:-350 ENST00000372841.7:-350 NM_173540:-350 NM_001284194:-350 uc001juz.3:-350 uc001jva.4:-350 BC036037:-350 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.17 | |cpg_percent=0.17 | ||
| + | |distance=-77 | ||
|distance_to_tss=399 | |distance_to_tss=399 | ||
| + | |end=73772740 | ||
|entrez_id=170384 | |entrez_id=170384 | ||
|gc_percent=0.741294 | |gc_percent=0.741294 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=fucosyltransferase 11 | |gene_description=fucosyltransferase 11 | ||
| − | |gene_name=FUT11 | + | |gene_id=170384 |
| + | |gene_name="fucosyltransferase 11 (alpha (1,3) fucosyltransferase)" | ||
| + | |gene_source=HGNC:19233 | ||
| + | |gene_symbol=FUT11 | ||
| + | |gene_synonyms=MGC33202 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:19233 | ||
|nearest_ensembl=ENSG00000196968 | |nearest_ensembl=ENSG00000196968 | ||
|nearest_promoter_id=NM_001284194 | |nearest_promoter_id=NM_001284194 | ||
|nearest_refseq=NM_173540 | |nearest_refseq=NM_173540 | ||
|nearest_unigene=Hs.588854 | |nearest_unigene=Hs.588854 | ||
| + | |num_trans=17 | ||
| + | |species=human | ||
| + | |start=73772640 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000465695.1 uc057ucy.1 AK095482 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105545.1 | |tss_id=hg_105545.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:40, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000465695.1 uc057ucy.1 AK095482 |
|---|---|
| Distance: | -77 |
| Num_trans: | 17 |
| All_trans: | ENST00000465695.1:-77 uc057ucy.1:-77 AK095482:-77 DQ894378:-308 EU176260:-308 AK314944:-332 BC100994:-347 BC100995:-347 BC100996:-347 BC100997:-347 ENST00000394790.2:-350 ENST00000372841.7:-350 NM_173540:-350 NM_001284194:-350 uc001juz.3:-350 uc001jva.4:-350 BC036037:-350 |
TATA-Box annotation
| Distance to TSS: | 399 |
|---|---|
| Nearest PromoterID: | NM_001284194 |
| Entrez ID: | 170384 |
| Nearest Unigene: | Hs.588854 |
| Nearest Refseq: | NM_173540 |
| Nearest Ensembl: | ENSG00000196968 |
| Gene Name: | "fucosyltransferase 11 (alpha (1,3) fucosyltransferase)" |
| Gene Alias: | - |
| Gene Description: | fucosyltransferase 11 |
| Gene Type: | protein-coding |
| CpG%: | 0.17 |
| GC%: | 0.741294 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
