Difference between revisions of "TSS:Hg 10555.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.065 |distance_to_tss=8853 |entrez_id=26869 |gc_percent=0.636816 |gene_alias=HSD4|RNU1G3 |gene_description="RNA, U1 small nuclear 3" |gene_name=RNU1-...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |RNU1G3= | ||
| + | |all_trans=ENST00000606899.1:44 uc057csn.1:44 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| + | |distance=44 | ||
|distance_to_tss=8853 | |distance_to_tss=8853 | ||
| + | |end=16904846 | ||
|entrez_id=26869 | |entrez_id=26869 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NR_004408 | |nearest_refseq=NR_004408 | ||
|nearest_unigene= | |nearest_unigene= | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=16904819 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000606899.1 uc057csn.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10555.1 | |tss_id=hg_10555.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 21:40, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000606899.1 uc057csn.1 |
|---|---|
| Distance: | 44 |
| Num_trans: | 2 |
| All_trans: | ENST00000606899.1:44 uc057csn.1:44 |
TATA-Box annotation
| Distance to TSS: | 8853 |
|---|---|
| Nearest PromoterID: | NR_004408 |
| Entrez ID: | 26869 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_004408 |
| Nearest Ensembl: | ENSG00000207513 |
| Gene Name: | RNU1-3 |
| Gene Alias: | HSD4 |
| Gene Description: | "RNA, U1 small nuclear 3" |
| Gene Type: | snRNA |
| CpG%: | 0.065 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
