Difference between revisions of "TSS:Hg 105550.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.045 |distance_to_tss=901 |entrez_id=170384 |gc_percent=0.621891 |gene_alias=- |gene_description=fucosyltransferase 11 |gene_name=FUT11 |gene_type=pr...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000489264.2:409 uc057ucz.1:409 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| + | |distance=409 | ||
|distance_to_tss=901 | |distance_to_tss=901 | ||
| + | |end=73773196 | ||
|entrez_id=170384 | |entrez_id=170384 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=fucosyltransferase 11 | |gene_description=fucosyltransferase 11 | ||
| − | |gene_name=FUT11 | + | |gene_id=170384 |
| + | |gene_name="fucosyltransferase 11 (alpha (1,3) fucosyltransferase)" | ||
| + | |gene_source=HGNC:19233 | ||
| + | |gene_symbol=FUT11 | ||
| + | |gene_synonyms=MGC33202 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:19233 | ||
|nearest_ensembl=ENSG00000196968 | |nearest_ensembl=ENSG00000196968 | ||
|nearest_promoter_id=NM_001284194 | |nearest_promoter_id=NM_001284194 | ||
|nearest_refseq=NM_173540 | |nearest_refseq=NM_173540 | ||
|nearest_unigene=Hs.588854 | |nearest_unigene=Hs.588854 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=73773187 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000489264.2 uc057ucz.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105550.1 | |tss_id=hg_105550.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:40, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000489264.2 uc057ucz.1 |
|---|---|
| Distance: | 409 |
| Num_trans: | 2 |
| All_trans: | ENST00000489264.2:409 uc057ucz.1:409 |
TATA-Box annotation
| Distance to TSS: | 901 |
|---|---|
| Nearest PromoterID: | NM_001284194 |
| Entrez ID: | 170384 |
| Nearest Unigene: | Hs.588854 |
| Nearest Refseq: | NM_173540 |
| Nearest Ensembl: | ENSG00000196968 |
| Gene Name: | "fucosyltransferase 11 (alpha (1,3) fucosyltransferase)" |
| Gene Alias: | - |
| Gene Description: | fucosyltransferase 11 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
