Difference between revisions of "TSS:Hg 105551.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.105 |distance_to_tss=8 |entrez_id=118487 |gc_percent=0.661692 |gene_alias=C10orf34|C2360|MRP-S37 |gene_description=coiled-coil-helix-coiled-coil-hel...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |C2360= | ||
| + | |MRP-S37= | ||
| + | |all_trans=ENST00000372837.3:0 ENST00000372833.5:0 NM_203298:0 uc001jvb.3:0 uc001jvc.5:0 AK098720:0 BC020852:0 BC015387:0 GQ129436:0 EU832829:0 KJ895337:0 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| + | |distance=0 | ||
|distance_to_tss=8 | |distance_to_tss=8 | ||
| + | |end=73782078 | ||
|entrez_id=118487 | |entrez_id=118487 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
|gene_alias=C10orf34|C2360|MRP-S37 | |gene_alias=C10orf34|C2360|MRP-S37 | ||
|gene_description=coiled-coil-helix-coiled-coil-helix domain containing 1 | |gene_description=coiled-coil-helix-coiled-coil-helix domain containing 1 | ||
| − | |gene_name=CHCHD1 | + | |gene_id=118487 |
| + | |gene_name=coiled-coil-helix-coiled-coil-helix domain containing 1 | ||
| + | |gene_source=HGNC:23518 | ||
| + | |gene_symbol=CHCHD1 | ||
| + | |gene_synonyms=FLJ25854 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23518 | ||
|nearest_ensembl=ENSG00000172586 | |nearest_ensembl=ENSG00000172586 | ||
|nearest_promoter_id=NM_203298 | |nearest_promoter_id=NM_203298 | ||
|nearest_refseq=NM_203298 | |nearest_refseq=NM_203298 | ||
|nearest_unigene=Hs.181174 | |nearest_unigene=Hs.181174 | ||
| + | |num_trans=11 | ||
| + | |species=human | ||
| + | |start=73782038 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000372837.3 ENST00000372833.5 NM_203298 uc001jvb.3 uc001jvc.5 AK098720 BC020852 BC015387 GQ129436 EU832829 KJ895337 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105551.1 | |tss_id=hg_105551.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A6NJX6 Q96BP2 | ||
}} | }} | ||
Revision as of 21:40, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000372837.3 ENST00000372833.5 NM_203298 uc001jvb.3 uc001jvc.5 AK098720 BC020852 BC015387 GQ129436 EU832829 KJ895337 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | ENST00000372837.3:0 ENST00000372833.5:0 NM_203298:0 uc001jvb.3:0 uc001jvc.5:0 AK098720:0 BC020852:0 BC015387:0 GQ129436:0 EU832829:0 KJ895337:0 |
TATA-Box annotation
| Distance to TSS: | 8 |
|---|---|
| Nearest PromoterID: | NM_203298 |
| Entrez ID: | 118487 |
| Nearest Unigene: | Hs.181174 |
| Nearest Refseq: | NM_203298 |
| Nearest Ensembl: | ENSG00000172586 |
| Gene Name: | coiled-coil-helix-coiled-coil-helix domain containing 1 |
| Gene Alias: | C10orf34 |
| Gene Description: | coiled-coil-helix-coiled-coil-helix domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
