Difference between revisions of "TSS:Hg 105617.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=-30120 |entrez_id=7417 |gc_percent=0.378109 |gene_alias=POR |gene_description=voltage dependent anion channel 2 |gene_name=VDAC2 |g...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=DQ577136:109 | ||
| + | |chr=chr10 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| + | |distance=109 | ||
|distance_to_tss=-30120 | |distance_to_tss=-30120 | ||
| + | |end=75180036 | ||
|entrez_id=7417 | |entrez_id=7417 | ||
|gc_percent=0.378109 | |gc_percent=0.378109 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_003375 | |nearest_refseq=NM_003375 | ||
|nearest_unigene=Hs.355927 | |nearest_unigene=Hs.355927 | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=75180032 | ||
| + | |strand=+ | ||
|tata_box="-6(TTTTTTAAAGAC,+,0.00)" | |tata_box="-6(TTTTTTAAAGAC,+,0.00)" | ||
| + | |transcript_name=DQ577136 | ||
| + | |tss_classification=no | ||
|tss_id=hg_105617.1 | |tss_id=hg_105617.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 21:43, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | DQ577136 |
|---|---|
| Distance: | 109 |
| Num_trans: | 1 |
| All_trans: | DQ577136:109 |
TATA-Box annotation
| Distance to TSS: | -30120 |
|---|---|
| Nearest PromoterID: | NM_001184783 |
| Entrez ID: | 7417 |
| Nearest Unigene: | Hs.355927 |
| Nearest Refseq: | NM_003375 |
| Nearest Ensembl: | ENSG00000165637 |
| Gene Name: | VDAC2 |
| Gene Alias: | POR |
| Gene Description: | voltage dependent anion channel 2 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.378109 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-6(TTTTTTAAAGAC,+,0.00)" |
