Difference between revisions of "TSS:Hg 105627.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=45 |entrez_id=253264 |gc_percent=0.567164 |gene_alias=- |gene_description=ZNF503 antisense RNA 1 |gene_name=ZNF503-AS1 |gene_typ...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000526759.5:0 uc021ptr.2:0 ENST00000416398.1:-34 uc001jxd.3:-34 AK023445:-34 ENST00000528121.5:-41 NR_038226:-41 NR_038225:-41 NR_038224:-41 NR_038223:-41 uc021pts.2:-41 ENST00000533822.1:65 uc021ptq.2:65 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance=0 | ||
|distance_to_tss=45 | |distance_to_tss=45 | ||
| + | |end=75296432 | ||
|entrez_id=253264 | |entrez_id=253264 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=ZNF503 antisense RNA 1 | |gene_description=ZNF503 antisense RNA 1 | ||
| − | |gene_name=ZNF503-AS1 | + | |gene_id=253264 |
| + | |gene_name=ZNF503 antisense RNA 1 | ||
| + | |gene_source=HGNC:27370 | ||
| + | |gene_symbol=ZNF503-AS1 | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:27370 | ||
|nearest_ensembl=ENSG00000226051 | |nearest_ensembl=ENSG00000226051 | ||
|nearest_promoter_id=NR_038226 | |nearest_promoter_id=NR_038226 | ||
|nearest_refseq=NR_038223 | |nearest_refseq=NR_038223 | ||
|nearest_unigene=Hs.662111 | |nearest_unigene=Hs.662111 | ||
| + | |num_trans=13 | ||
| + | |species=human | ||
| + | |start=75296423 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000526759.5 uc021ptr.2 | ||
| + | |tss_classification=no | ||
|tss_id=hg_105627.1 | |tss_id=hg_105627.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:43, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000526759.5 uc021ptr.2 |
|---|---|
| Distance: | 0 |
| Num_trans: | 13 |
| All_trans: | ENST00000526759.5:0 uc021ptr.2:0 ENST00000416398.1:-34 uc001jxd.3:-34 AK023445:-34 ENST00000528121.5:-41 NR_038226:-41 NR_038225:-41 NR_038224:-41 NR_038223:-41 uc021pts.2:-41 ENST00000533822.1:65 uc021ptq.2:65 |
TATA-Box annotation
| Distance to TSS: | 45 |
|---|---|
| Nearest PromoterID: | NR_038226 |
| Entrez ID: | 253264 |
| Nearest Unigene: | Hs.662111 |
| Nearest Refseq: | NR_038223 |
| Nearest Ensembl: | ENSG00000226051 |
| Gene Name: | ZNF503 antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | ZNF503 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
