Difference between revisions of "TSS:Hg 10566.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.14 |distance_to_tss=-2 |entrez_id=23400 |gc_percent=0.78607 |gene_alias=CLN12|HSA9947|KRPPD|PARK9 |gene_description=ATPase 13A2 |gene_name=ATP13A2 |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |HSA9947= | ||
| + | |KRPPD= | ||
| + | |PARK9= | ||
| + | |all_trans=NM_001141974:0 NM_001141973:0 NM_022089:0 ENST00000452699.5:41 ENST00000617114.4:41 uc001bab.2:41 uc057ctj.1:41 AK290210:41 ENST00000341676.9:54 uc001bac.3:54 BC030267:54 AY461712:185 ENST00000326735.12:197 uc001baa.3:197 AL354615:197 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
| + | |distance=0 | ||
|distance_to_tss=-2 | |distance_to_tss=-2 | ||
| + | |end=17011979 | ||
|entrez_id=23400 | |entrez_id=23400 | ||
|gc_percent=0.78607 | |gc_percent=0.78607 | ||
|gene_alias=CLN12|HSA9947|KRPPD|PARK9 | |gene_alias=CLN12|HSA9947|KRPPD|PARK9 | ||
|gene_description=ATPase 13A2 | |gene_description=ATPase 13A2 | ||
| − | |gene_name=ATP13A2 | + | |gene_id=23400 |
| + | |gene_name=ATPase 13A2 | ||
| + | |gene_source=HGNC:30213 | ||
| + | |gene_symbol=ATP13A2 | ||
| + | |gene_synonyms=CLN12 HSA9947 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:30213 | ||
|nearest_ensembl=ENSG00000159363 | |nearest_ensembl=ENSG00000159363 | ||
|nearest_promoter_id=NM_001141974 | |nearest_promoter_id=NM_001141974 | ||
|nearest_refseq=NM_022089 | |nearest_refseq=NM_022089 | ||
|nearest_unigene=Hs.128866 | |nearest_unigene=Hs.128866 | ||
| + | |num_trans=15 | ||
| + | |species=human | ||
| + | |start=17011968 | ||
| + | |strand=- | ||
| + | |transcript_name=NM_001141974 NM_001141973 NM_022089 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10566.1 | |tss_id=hg_10566.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q9NQ11 | ||
}} | }} | ||
Revision as of 21:45, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NM_001141974 NM_001141973 NM_022089 |
|---|---|
| Distance: | 0 |
| Num_trans: | 15 |
| All_trans: | NM_001141974:0 NM_001141973:0 NM_022089:0 ENST00000452699.5:41 ENST00000617114.4:41 uc001bab.2:41 uc057ctj.1:41 AK290210:41 ENST00000341676.9:54 uc001bac.3:54 BC030267:54 AY461712:185 ENST00000326735.12:197 uc001baa.3:197 AL354615:197 |
TATA-Box annotation
| Distance to TSS: | -2 |
|---|---|
| Nearest PromoterID: | NM_001141974 |
| Entrez ID: | 23400 |
| Nearest Unigene: | Hs.128866 |
| Nearest Refseq: | NM_022089 |
| Nearest Ensembl: | ENSG00000159363 |
| Gene Name: | ATPase 13A2 |
| Gene Alias: | CLN12 |
| Gene Description: | ATPase 13A2 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.78607 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
