Difference between revisions of "TSS:Hg 10569.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=8919 |entrez_id=6390 |gc_percent=0.447761 |gene_alias=CWS2|IP|PGL4|SDH|SDH1|SDH2|SDHIP |gene_description=succinate dehydrogenase...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |IP= | ||
| + | |PGL4= | ||
| + | |SDH= | ||
| + | |SDH1= | ||
| + | |SDH2= | ||
| + | |SDHIP= | ||
| + | |all_trans=ENST00000491274.5:22 uc057ctt.1:22 D10245:350 M32246:350 ENST00000475506.1:364 uc057ctu.1:364 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance=22 | ||
|distance_to_tss=8919 | |distance_to_tss=8919 | ||
| + | |end=17045262 | ||
|entrez_id=6390 | |entrez_id=6390 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
|gene_alias=CWS2|IP|PGL4|SDH|SDH1|SDH2|SDHIP | |gene_alias=CWS2|IP|PGL4|SDH|SDH1|SDH2|SDHIP | ||
|gene_description=succinate dehydrogenase complex iron sulfur subunit B | |gene_description=succinate dehydrogenase complex iron sulfur subunit B | ||
| − | |gene_name=SDHB | + | |gene_id=6390 |
| + | |gene_name=succinate dehydrogenase complex iron sulfur subunit B | ||
| + | |gene_source=HGNC:10681 | ||
| + | |gene_symbol=SDHB | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:10681 | ||
|nearest_ensembl=ENSG00000117118 | |nearest_ensembl=ENSG00000117118 | ||
|nearest_promoter_id=NM_003000 | |nearest_promoter_id=NM_003000 | ||
|nearest_refseq=NM_003000 | |nearest_refseq=NM_003000 | ||
|nearest_unigene=Hs.465924 | |nearest_unigene=Hs.465924 | ||
| + | |num_trans=6 | ||
| + | |species=human | ||
| + | |start=17045240 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000491274.5 uc057ctt.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_10569.1 | |tss_id=hg_10569.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A087WWT1 | ||
}} | }} | ||
Revision as of 21:46, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000491274.5 uc057ctt.1 |
|---|---|
| Distance: | 22 |
| Num_trans: | 6 |
| All_trans: | ENST00000491274.5:22 uc057ctt.1:22 D10245:350 M32246:350 ENST00000475506.1:364 uc057ctu.1:364 |
TATA-Box annotation
| Distance to TSS: | 8919 |
|---|---|
| Nearest PromoterID: | NM_003000 |
| Entrez ID: | 6390 |
| Nearest Unigene: | Hs.465924 |
| Nearest Refseq: | NM_003000 |
| Nearest Ensembl: | ENSG00000117118 |
| Gene Name: | succinate dehydrogenase complex iron sulfur subunit B |
| Gene Alias: | CWS2 |
| Gene Description: | succinate dehydrogenase complex iron sulfur subunit B |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
