Difference between revisions of "TSS:Hg 10576.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.135 |distance_to_tss=1 |entrez_id=11240 |gc_percent=0.776119 |gene_alias=PAD-H19|PAD2|PDI2 |gene_description=peptidyl arginine deiminase 2 |gene_nam...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |PAD2= | ||
| + | |PDI2= | ||
| + | |all_trans=NM_007365:0 AK295783:0 ENST00000375486.8:10 ENST00000375481.1:10 uc001baf.4:10 uc001bag.2:10 AB023211:10 AB030176:10 BC009701:10 AB587350:74 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
| + | |distance=0 | ||
|distance_to_tss=1 | |distance_to_tss=1 | ||
| + | |end=17119459 | ||
|entrez_id=11240 | |entrez_id=11240 | ||
|gc_percent=0.776119 | |gc_percent=0.776119 | ||
|gene_alias=PAD-H19|PAD2|PDI2 | |gene_alias=PAD-H19|PAD2|PDI2 | ||
|gene_description=peptidyl arginine deiminase 2 | |gene_description=peptidyl arginine deiminase 2 | ||
| − | |gene_name=PADI2 | + | |gene_id=11240 |
| + | |gene_name="peptidyl arginine deiminase, type II" | ||
| + | |gene_source=HGNC:18341 | ||
| + | |gene_symbol=PADI2 | ||
| + | |gene_synonyms=KIAA0994 PDI2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:18341 | ||
|nearest_ensembl=ENSG00000117115 | |nearest_ensembl=ENSG00000117115 | ||
|nearest_promoter_id=NM_007365 | |nearest_promoter_id=NM_007365 | ||
|nearest_refseq=NM_007365 | |nearest_refseq=NM_007365 | ||
|nearest_unigene=Hs.33455 | |nearest_unigene=Hs.33455 | ||
| + | |num_trans=10 | ||
| + | |species=human | ||
| + | |start=17119444 | ||
| + | |strand=- | ||
| + | |transcript_name=NM_007365 AK295783 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10576.1 | |tss_id=hg_10576.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B4DIU3 Q9Y2J8 | ||
}} | }} | ||
Revision as of 21:49, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_007365 AK295783 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10 |
| All_trans: | NM_007365:0 AK295783:0 ENST00000375486.8:10 ENST00000375481.1:10 uc001baf.4:10 uc001bag.2:10 AB023211:10 AB030176:10 BC009701:10 AB587350:74 |
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NM_007365 |
| Entrez ID: | 11240 |
| Nearest Unigene: | Hs.33455 |
| Nearest Refseq: | NM_007365 |
| Nearest Ensembl: | ENSG00000117115 |
| Gene Name: | "peptidyl arginine deiminase, type II" |
| Gene Alias: | PAD-H19 |
| Gene Description: | peptidyl arginine deiminase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.776119 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
