Difference between revisions of "TSS:Hg 105779.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.055 |distance_to_tss=-36360 |entrez_id=10105 |gc_percent=0.656716 |gene_alias=CYP3|CyP-M|Cyp-D|CypD |gene_description=peptidylprolyl isomerase F |ge...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CyP-M= | ||
| + | |Cyp-D= | ||
| + | |CypD= | ||
| + | |all_trans=BC035890:22 BC049845:22 BC025342:-137 BC068072:-137 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| + | |distance=22 | ||
|distance_to_tss=-36360 | |distance_to_tss=-36360 | ||
| + | |end=79311118 | ||
|entrez_id=10105 | |entrez_id=10105 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
|gene_alias=CYP3|CyP-M|Cyp-D|CypD | |gene_alias=CYP3|CyP-M|Cyp-D|CypD | ||
|gene_description=peptidylprolyl isomerase F | |gene_description=peptidylprolyl isomerase F | ||
| − | |gene_name= | + | |gene_id=57178 |
| + | |gene_name=zinc finger MIZ-type containing 1 | ||
| + | |gene_source=HGNC:16493 | ||
| + | |gene_symbol=ZMIZ1 | ||
| + | |gene_synonyms=FLJ13541 KIAA1224 MIZ RP11-519K18.1 Zimp10 hZIMP10 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:16493 | ||
|nearest_ensembl=ENSG00000108179 | |nearest_ensembl=ENSG00000108179 | ||
|nearest_promoter_id=NM_005729 | |nearest_promoter_id=NM_005729 | ||
|nearest_refseq=NM_005729 | |nearest_refseq=NM_005729 | ||
|nearest_unigene=Hs.381072 | |nearest_unigene=Hs.381072 | ||
| + | |num_trans=4 | ||
| + | |species=human | ||
| + | |start=79311090 | ||
| + | |strand=+ | ||
| + | |transcript_name=BC035890 BC049845 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105779.1 | |tss_id=hg_105779.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:50, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC035890 BC049845 |
|---|---|
| Distance: | 22 |
| Num_trans: | 4 |
| All_trans: | BC035890:22 BC049845:22 BC025342:-137 BC068072:-137 |
TATA-Box annotation
| Distance to TSS: | -36360 |
|---|---|
| Nearest PromoterID: | NM_005729 |
| Entrez ID: | 10105 |
| Nearest Unigene: | Hs.381072 |
| Nearest Refseq: | NM_005729 |
| Nearest Ensembl: | ENSG00000108179 |
| Gene Name: | zinc finger MIZ-type containing 1 |
| Gene Alias: | CYP3 |
| Gene Description: | peptidylprolyl isomerase F |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
