Difference between revisions of "TSS:Hg 105793.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.165 |distance_to_tss=64 |entrez_id=10105 |gc_percent=0.756219 |gene_alias=CYP3|CyP-M|Cyp-D|CypD |gene_description=peptidylprolyl isomerase F |gene_n...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CyP-M= | ||
| + | |Cyp-D= | ||
| + | |CypD= | ||
| + | |all_trans=AB529152:5 CU678858:9 HQ447889:9 EU831447:9 ENST00000492149.1:-16 uc057uld.1:-16 BC013204:-29 BC110299:-29 ENST00000225174.7:-38 uc001kai.4:-38 BC005020:-38 M80254:-39 AK296669:-45 ENST00000498681.5:-47 ENST00000472580.6:-47 uc057ulb.1:-47 uc057ulc.1:-47 AK312757:-47 NM_005729:-52 ENST00000448165.1:118 uc057ule.1:118 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.165 | |cpg_percent=0.165 | ||
| + | |distance=5 | ||
|distance_to_tss=64 | |distance_to_tss=64 | ||
| + | |end=79347540 | ||
|entrez_id=10105 | |entrez_id=10105 | ||
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
|gene_alias=CYP3|CyP-M|Cyp-D|CypD | |gene_alias=CYP3|CyP-M|Cyp-D|CypD | ||
|gene_description=peptidylprolyl isomerase F | |gene_description=peptidylprolyl isomerase F | ||
| − | |gene_name=PPIF | + | |gene_id=10105 |
| + | |gene_name=peptidylprolyl isomerase F | ||
| + | |gene_source=HGNC:9259 | ||
| + | |gene_symbol=PPIF | ||
| + | |gene_synonyms=Cyp-D hCyP3 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:9259 | ||
|nearest_ensembl=ENSG00000108179 | |nearest_ensembl=ENSG00000108179 | ||
|nearest_promoter_id=NM_005729 | |nearest_promoter_id=NM_005729 | ||
|nearest_refseq=NM_005729 | |nearest_refseq=NM_005729 | ||
|nearest_unigene=Hs.381072 | |nearest_unigene=Hs.381072 | ||
| + | |num_trans=21 | ||
| + | |species=human | ||
| + | |start=79347515 | ||
| + | |strand=+ | ||
| + | |transcript_name=AB529152 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105793.1 | |tss_id=hg_105793.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:50, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AB529152 |
|---|---|
| Distance: | 5 |
| Num_trans: | 21 |
| All_trans: | AB529152:5 CU678858:9 HQ447889:9 EU831447:9 ENST00000492149.1:-16 uc057uld.1:-16 BC013204:-29 BC110299:-29 ENST00000225174.7:-38 uc001kai.4:-38 BC005020:-38 M80254:-39 AK296669:-45 ENST00000498681.5:-47 ENST00000472580.6:-47 uc057ulb.1:-47 uc057ulc.1:-47 AK312757:-47 NM_005729:-52 ENST00000448165.1:118 uc057ule.1:118 |
TATA-Box annotation
| Distance to TSS: | 64 |
|---|---|
| Nearest PromoterID: | NM_005729 |
| Entrez ID: | 10105 |
| Nearest Unigene: | Hs.381072 |
| Nearest Refseq: | NM_005729 |
| Nearest Ensembl: | ENSG00000108179 |
| Gene Name: | peptidylprolyl isomerase F |
| Gene Alias: | CYP3 |
| Gene Description: | peptidylprolyl isomerase F |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
