Difference between revisions of "TSS:Hg 105841.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.1 |distance_to_tss=32 |entrez_id=80195 |gc_percent=0.681592 |gene_alias=C10orf57|bA369J21.6 |gene_description=transmembrane protein 254 |gene_name=T...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000372281.7:0 ENST00000372275.5:0 ENST00000372274.5:0 uc001kbl.5:0 uc031pwf.2:0 uc031pwd.2:0 AK222536:0 AK023325:0 BC022252:0 KJ894792:0 CR457310:0 ENST00000372277.7:-10 ENST00000472622.5:-10 ENST00000613758.4:-10 NM_001270373:-10 NM_001270372:-10 NM_025125:-10 NM_001270371:-10 NM_001270370:-10 uc057umk.1:-10 uc057uml.1:-10 uc009xsn.5:-10 AK309425:-214 AK300490:312 NM_001270369:322 NM_001270368:322 NM_001270367:322 ENST00000372273.7:335 uc057umm.1:335 AL832483:335 AK309980:347 | ||
| + | |bA369J21.6= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| + | |distance=0 | ||
|distance_to_tss=32 | |distance_to_tss=32 | ||
| + | |end=80078701 | ||
|entrez_id=80195 | |entrez_id=80195 | ||
|gc_percent=0.681592 | |gc_percent=0.681592 | ||
|gene_alias=C10orf57|bA369J21.6 | |gene_alias=C10orf57|bA369J21.6 | ||
|gene_description=transmembrane protein 254 | |gene_description=transmembrane protein 254 | ||
| − | |gene_name=TMEM254 | + | |gene_id=80195 |
| + | |gene_name=transmembrane protein 254 | ||
| + | |gene_source=HGNC:25804 | ||
| + | |gene_symbol=TMEM254 | ||
| + | |gene_synonyms=FLJ13263 bA369J21.6 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:25804 | ||
|nearest_ensembl=ENSG00000133678 | |nearest_ensembl=ENSG00000133678 | ||
|nearest_promoter_id=NM_025125 | |nearest_promoter_id=NM_025125 | ||
|nearest_refseq=NM_025125 | |nearest_refseq=NM_025125 | ||
|nearest_unigene=Hs.169982 | |nearest_unigene=Hs.169982 | ||
| + | |num_trans=31 | ||
| + | |species=human | ||
| + | |start=80078655 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000372281.7 ENST00000372275.5 ENST00000372274.5 uc001kbl.5 uc031pwf.2 uc031pwd.2 AK222536 AK023325 BC022252 KJ894792 CR457310 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105841.1 | |tss_id=hg_105841.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q8TBM7 | ||
}} | }} | ||
Revision as of 21:53, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000372281.7 ENST00000372275.5 ENST00000372274.5 uc001kbl.5 uc031pwf.2 uc031pwd.2 AK222536 AK023325 BC022252 KJ894792 CR457310 |
|---|---|
| Distance: | 0 |
| Num_trans: | 31 |
| All_trans: | ENST00000372281.7:0 ENST00000372275.5:0 ENST00000372274.5:0 uc001kbl.5:0 uc031pwf.2:0 uc031pwd.2:0 AK222536:0 AK023325:0 BC022252:0 KJ894792:0 CR457310:0 ENST00000372277.7:-10 ENST00000472622.5:-10 ENST00000613758.4:-10 NM_001270373:-10 NM_001270372:-10 NM_025125:-10 NM_001270371:-10 NM_001270370:-10 uc057umk.1:-10 uc057uml.1:-10 uc009xsn.5:-10 AK309425:-214 AK300490:312 NM_001270369:322 NM_001270368:322 NM_001270367:322 ENST00000372273.7:335 uc057umm.1:335 AL832483:335 AK309980:347 |
TATA-Box annotation
| Distance to TSS: | 32 |
|---|---|
| Nearest PromoterID: | NM_025125 |
| Entrez ID: | 80195 |
| Nearest Unigene: | Hs.169982 |
| Nearest Refseq: | NM_025125 |
| Nearest Ensembl: | ENSG00000133678 |
| Gene Name: | transmembrane protein 254 |
| Gene Alias: | C10orf57 |
| Gene Description: | transmembrane protein 254 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.681592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
