Difference between revisions of "TSS:Hg 105872.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.195 |distance_to_tss=32 |entrez_id=81619 |gc_percent=0.835821 |gene_alias=DC-TM4F2|TM4SF14 |gene_description=tetraspanin 14 |gene_name=TSPAN14 |gene...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |TM4SF14= | ||
| + | |all_trans=ENST00000372157.6:0 ENST00000469149.1:0 ENST00000372164.7:0 uc057uno.1:0 uc057unp.1:0 uc001kci.5:0 AK295321:0 AL136638:0 AK074558:0 AF311903:0 BC002920:5 NM_001128309:-15 NM_030927:-15 BC093016:-15 ENST00000372158.5:22 uc057unq.1:22 ENST00000341863.10:24 uc057unr.1:24 ENST00000481124.5:-32 uc009xss.4:-32 ENST00000429989.7:-131 uc001kcj.5:-131 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.195 | |cpg_percent=0.195 | ||
| + | |distance=0 | ||
|distance_to_tss=32 | |distance_to_tss=32 | ||
| + | |end=80454331 | ||
|entrez_id=81619 | |entrez_id=81619 | ||
|gc_percent=0.835821 | |gc_percent=0.835821 | ||
|gene_alias=DC-TM4F2|TM4SF14 | |gene_alias=DC-TM4F2|TM4SF14 | ||
|gene_description=tetraspanin 14 | |gene_description=tetraspanin 14 | ||
| − | |gene_name=TSPAN14 | + | |gene_id=81619 |
| + | |gene_name=tetraspanin 14 | ||
| + | |gene_source=HGNC:23303 | ||
| + | |gene_symbol=TSPAN14 | ||
| + | |gene_synonyms=DC-TM4F2 MGC11352 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23303 | ||
|nearest_ensembl=ENSG00000108219 | |nearest_ensembl=ENSG00000108219 | ||
|nearest_promoter_id=NM_001128309 | |nearest_promoter_id=NM_001128309 | ||
|nearest_refseq=NM_030927 | |nearest_refseq=NM_030927 | ||
|nearest_unigene=Hs.718943 | |nearest_unigene=Hs.718943 | ||
| + | |num_trans=22 | ||
| + | |species=human | ||
| + | |start=80454296 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000372157.6 ENST00000469149.1 ENST00000372164.7 uc057uno.1 uc057unp.1 uc001kci.5 AK295321 AL136638 AK074558 AF311903 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105872.1 | |tss_id=hg_105872.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A6NEP9 Q8N2P5 Q8NG11 | ||
}} | }} | ||
Revision as of 21:54, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000372157.6 ENST00000469149.1 ENST00000372164.7 uc057uno.1 uc057unp.1 uc001kci.5 AK295321 AL136638 AK074558 AF311903 |
|---|---|
| Distance: | 0 |
| Num_trans: | 22 |
| All_trans: | ENST00000372157.6:0 ENST00000469149.1:0 ENST00000372164.7:0 uc057uno.1:0 uc057unp.1:0 uc001kci.5:0 AK295321:0 AL136638:0 AK074558:0 AF311903:0 BC002920:5 NM_001128309:-15 NM_030927:-15 BC093016:-15 ENST00000372158.5:22 uc057unq.1:22 ENST00000341863.10:24 uc057unr.1:24 ENST00000481124.5:-32 uc009xss.4:-32 ENST00000429989.7:-131 uc001kcj.5:-131 |
TATA-Box annotation
| Distance to TSS: | 32 |
|---|---|
| Nearest PromoterID: | NM_001128309 |
| Entrez ID: | 81619 |
| Nearest Unigene: | Hs.718943 |
| Nearest Refseq: | NM_030927 |
| Nearest Ensembl: | ENSG00000108219 |
| Gene Name: | tetraspanin 14 |
| Gene Alias: | DC-TM4F2 |
| Gene Description: | tetraspanin 14 |
| Gene Type: | protein-coding |
| CpG%: | 0.195 |
| GC%: | 0.835821 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
