Difference between revisions of "TSS:Hg 105904.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.115 |distance_to_tss=215 |entrez_id=10718 |gc_percent=0.691542 |gene_alias=HRG3|pro-NRG3 |gene_description=neuregulin 3 |gene_name=NRG3 |gene_type=p...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=AK296563:-31 ENST00000404547.5:-182 uc021pvc.2:-182 DQ001411:-182 HM068873:-182 HM068874:-182 ENST00000372141.6:-209 NM_001165972:-209 NM_001010848:-209 uc001kco.3:-209 BC136811:-209 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| + | |distance=-31 | ||
|distance_to_tss=215 | |distance_to_tss=215 | ||
| + | |end=81875536 | ||
|entrez_id=10718 | |entrez_id=10718 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
|gene_alias=HRG3|pro-NRG3 | |gene_alias=HRG3|pro-NRG3 | ||
|gene_description=neuregulin 3 | |gene_description=neuregulin 3 | ||
| − | |gene_name=NRG3 | + | |gene_id=10718 |
| + | |gene_name=neuregulin 3 | ||
| + | |gene_source=HGNC:7999 | ||
| + | |gene_symbol=NRG3 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:7999 | ||
|nearest_ensembl=ENSG00000185737 | |nearest_ensembl=ENSG00000185737 | ||
|nearest_promoter_id=NM_001010848 | |nearest_promoter_id=NM_001010848 | ||
|nearest_refseq=NM_001010848 | |nearest_refseq=NM_001010848 | ||
|nearest_unigene=Hs.125119 | |nearest_unigene=Hs.125119 | ||
| + | |num_trans=11 | ||
| + | |pro-NRG3= | ||
| + | |species=human | ||
| + | |start=81875522 | ||
| + | |strand=+ | ||
| + | |transcript_name=AK296563 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105904.1 | |tss_id=hg_105904.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B4DKH1 | ||
}} | }} | ||
Revision as of 21:55, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK296563 |
|---|---|
| Distance: | -31 |
| Num_trans: | 11 |
| All_trans: | AK296563:-31 ENST00000404547.5:-182 uc021pvc.2:-182 DQ001411:-182 HM068873:-182 HM068874:-182 ENST00000372141.6:-209 NM_001165972:-209 NM_001010848:-209 uc001kco.3:-209 BC136811:-209 |
TATA-Box annotation
| Distance to TSS: | 215 |
|---|---|
| Nearest PromoterID: | NM_001010848 |
| Entrez ID: | 10718 |
| Nearest Unigene: | Hs.125119 |
| Nearest Refseq: | NM_001010848 |
| Nearest Ensembl: | ENSG00000185737 |
| Gene Name: | neuregulin 3 |
| Gene Alias: | HRG3 |
| Gene Description: | neuregulin 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
