Difference between revisions of "TSS:Hg 105927.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.105 |distance_to_tss=115 |entrez_id=27069 |gc_percent=0.656716 |gene_alias=DERP2|HSPC282|MICS1|My021|PTD010|TMBIM5 |gene_description=growth hormone...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |HSPC282= | ||
| + | |MICS1= | ||
| + | |My021= | ||
| + | |PTD010= | ||
| + | |TMBIM5= | ||
| + | |all_trans=AK130094:0 BC022872:0 AK225318:0 AF060923:0 AK298332:0 AK098770:0 BC010354:0 AK130097:0 AK297960:0 AK292864:0 AY358824:0 AF161400:-1 AL136713:-2 ENST00000618907.3:-19 uc057uon.1:-19 AF131820:-19 AF078863:-19 AK299937:-37 ENST00000372134.5:-81 uc001kcs.2:-81 NM_014394:-92 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| + | |distance=0 | ||
|distance_to_tss=115 | |distance_to_tss=115 | ||
| + | |end=84139568 | ||
|entrez_id=27069 | |entrez_id=27069 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
|gene_alias=DERP2|HSPC282|MICS1|My021|PTD010|TMBIM5 | |gene_alias=DERP2|HSPC282|MICS1|My021|PTD010|TMBIM5 | ||
|gene_description=growth hormone inducible transmembrane protein | |gene_description=growth hormone inducible transmembrane protein | ||
| − | |gene_name=GHITM | + | |gene_id=27069 |
| + | |gene_name=growth hormone inducible transmembrane protein | ||
| + | |gene_source=HGNC:17281 | ||
| + | |gene_symbol=GHITM | ||
| + | |gene_synonyms=DERP2 HSPC282 My021 PTD010 TMBIM5 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:17281 | ||
|nearest_ensembl=ENSG00000165678 | |nearest_ensembl=ENSG00000165678 | ||
|nearest_promoter_id=NM_014394 | |nearest_promoter_id=NM_014394 | ||
|nearest_refseq=NM_014394 | |nearest_refseq=NM_014394 | ||
|nearest_unigene=Hs.352656 | |nearest_unigene=Hs.352656 | ||
| + | |num_trans=21 | ||
| + | |species=human | ||
| + | |start=84139520 | ||
| + | |strand=+ | ||
| + | |transcript_name=AK130094 BC022872 AK225318 AF060923 AK298332 AK098770 BC010354 AK130097 AK297960 AK292864 AY358824 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105927.1 | |tss_id=hg_105927.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B4DNL0 B4DPG9 | ||
}} | }} | ||
Revision as of 21:56, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK130094 BC022872 AK225318 AF060923 AK298332 AK098770 BC010354 AK130097 AK297960 AK292864 AY358824 |
|---|---|
| Distance: | 0 |
| Num_trans: | 21 |
| All_trans: | AK130094:0 BC022872:0 AK225318:0 AF060923:0 AK298332:0 AK098770:0 BC010354:0 AK130097:0 AK297960:0 AK292864:0 AY358824:0 AF161400:-1 AL136713:-2 ENST00000618907.3:-19 uc057uon.1:-19 AF131820:-19 AF078863:-19 AK299937:-37 ENST00000372134.5:-81 uc001kcs.2:-81 NM_014394:-92 |
TATA-Box annotation
| Distance to TSS: | 115 |
|---|---|
| Nearest PromoterID: | NM_014394 |
| Entrez ID: | 27069 |
| Nearest Unigene: | Hs.352656 |
| Nearest Refseq: | NM_014394 |
| Nearest Ensembl: | ENSG00000165678 |
| Gene Name: | growth hormone inducible transmembrane protein |
| Gene Alias: | DERP2 |
| Gene Description: | growth hormone inducible transmembrane protein |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
