Difference between revisions of "TSS:Hg 105929.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=-38 |entrez_id=387695 |gc_percent=0.507463 |gene_alias=AP-57|CSBF|UNQ1833 |gene_description=chromosome 10 open reading frame 99...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CSBF= | ||
| + | |UNQ1833= | ||
| + | |all_trans=ENST00000372126.3:-21 uc001kcu.4:-21 NM_207373:37 AY358751:50 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| + | |distance=-21 | ||
|distance_to_tss=-38 | |distance_to_tss=-38 | ||
| + | |end=84173761 | ||
|entrez_id=387695 | |entrez_id=387695 | ||
|gc_percent=0.507463 | |gc_percent=0.507463 | ||
|gene_alias=AP-57|CSBF|UNQ1833 | |gene_alias=AP-57|CSBF|UNQ1833 | ||
|gene_description=chromosome 10 open reading frame 99 | |gene_description=chromosome 10 open reading frame 99 | ||
| − | |gene_name=C10orf99 | + | |gene_id=387695 |
| + | |gene_name=chromosome 10 open reading frame 99 | ||
| + | |gene_source=HGNC:31428 | ||
| + | |gene_symbol=C10orf99 | ||
| + | |gene_synonyms=AP-57 CSBF FLJ21763 RLLV1833 UNQ1833 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:31428 | ||
|nearest_ensembl=ENSG00000188373 | |nearest_ensembl=ENSG00000188373 | ||
|nearest_promoter_id=NM_207373 | |nearest_promoter_id=NM_207373 | ||
|nearest_refseq=NM_207373 | |nearest_refseq=NM_207373 | ||
|nearest_unigene=Hs.298713 | |nearest_unigene=Hs.298713 | ||
| + | |num_trans=4 | ||
| + | |species=human | ||
| + | |start=84173758 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000372126.3 uc001kcu.4 | ||
| + | |tss_classification=no | ||
|tss_id=hg_105929.1 | |tss_id=hg_105929.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q6UWK7 | ||
}} | }} | ||
Revision as of 21:56, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000372126.3 uc001kcu.4 |
|---|---|
| Distance: | -21 |
| Num_trans: | 4 |
| All_trans: | ENST00000372126.3:-21 uc001kcu.4:-21 NM_207373:37 AY358751:50 |
TATA-Box annotation
| Distance to TSS: | -38 |
|---|---|
| Nearest PromoterID: | NM_207373 |
| Entrez ID: | 387695 |
| Nearest Unigene: | Hs.298713 |
| Nearest Refseq: | NM_207373 |
| Nearest Ensembl: | ENSG00000188373 |
| Gene Name: | chromosome 10 open reading frame 99 |
| Gene Alias: | AP-57 |
| Gene Description: | chromosome 10 open reading frame 99 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.507463 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
