Difference between revisions of "TSS:Hg 105950.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=12780 |entrez_id=54462 |gc_percent=0.447761 |gene_alias=FAM190B|Gcap14|KIAA1128|bA486O22.1 |gene_description=coiled-coil serine...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Gcap14= | ||
| + | |KIAA1128= | ||
| + | |bA486O22.1= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance= | ||
|distance_to_tss=12780 | |distance_to_tss=12780 | ||
| + | |end=84341371 | ||
|entrez_id=54462 | |entrez_id=54462 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NM_018999 | |nearest_refseq=NM_018999 | ||
|nearest_unigene=Hs.461988 | |nearest_unigene=Hs.461988 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=84341366 | ||
| + | |strand=+ | ||
|tata_box="-7(TTTTTTAGAGGC,+,0.00)" | |tata_box="-7(TTTTTTAGAGGC,+,0.00)" | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_105950.1 | |tss_id=hg_105950.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 21:57, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 12780 |
|---|---|
| Nearest PromoterID: | NM_001284241 |
| Entrez ID: | 54462 |
| Nearest Unigene: | Hs.461988 |
| Nearest Refseq: | NM_018999 |
| Nearest Ensembl: | ENSG00000107771 |
| Gene Name: | CCSER2 |
| Gene Alias: | FAM190B |
| Gene Description: | coiled-coil serine rich protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-7(TTTTTTAGAGGC,+,0.00)" |
