Difference between revisions of "TSS:Hg 105954.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=-8 |entrez_id=54462 |gc_percent=0.353234 |gene_alias=FAM190B|Gcap14|KIAA1128|bA486O22.1 |gene_description=coiled-coil serine ri...") |
|||
Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
+ | |Gcap14= | ||
+ | |KIAA1128= | ||
+ | |all_trans=ENST00000493409.5:0 NM_001284242:0 uc057upe.1:0 ENST00000494586.5:-217 uc057upd.1:-217 ENST00000543283.2:-225 NM_001284243:-225 uc010qme.2:-225 AK294321:-225 | ||
+ | |bA486O22.1= | ||
+ | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
+ | |distance=0 | ||
|distance_to_tss=-8 | |distance_to_tss=-8 | ||
+ | |end=84425184 | ||
|entrez_id=54462 | |entrez_id=54462 | ||
|gc_percent=0.353234 | |gc_percent=0.353234 | ||
|gene_alias=FAM190B|Gcap14|KIAA1128|bA486O22.1 | |gene_alias=FAM190B|Gcap14|KIAA1128|bA486O22.1 | ||
|gene_description=coiled-coil serine rich protein 2 | |gene_description=coiled-coil serine rich protein 2 | ||
− | |gene_name=CCSER2 | + | |gene_id=54462 |
+ | |gene_name=coiled-coil serine rich protein 2 | ||
+ | |gene_source=HGNC:29197 | ||
+ | |gene_symbol=CCSER2 | ||
+ | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
+ | |hgnc_mgi_id=HGNC:29197 | ||
|nearest_ensembl=ENSG00000107771 | |nearest_ensembl=ENSG00000107771 | ||
|nearest_promoter_id=NM_001284242 | |nearest_promoter_id=NM_001284242 | ||
|nearest_refseq=NM_018999 | |nearest_refseq=NM_018999 | ||
|nearest_unigene=Hs.461988 | |nearest_unigene=Hs.461988 | ||
+ | |num_trans=9 | ||
+ | |species=human | ||
+ | |start=84425163 | ||
+ | |strand=+ | ||
+ | |transcript_name=ENST00000493409.5 NM_001284242 uc057upe.1 | ||
+ | |tss_classification=no | ||
|tss_id=hg_105954.1 | |tss_id=hg_105954.1 | ||
+ | |tss_score=1 | ||
+ | |uniprot_id=Q9H7U1 | ||
}} | }} |
Revision as of 21:57, 8 March 2018
Basic information about the TSS
|
|
Start of the center position in the TSS region: | |
---|---|
End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
Transcript_name: | ENST00000493409.5 NM_001284242 uc057upe.1 |
---|---|
Distance: | 0 |
Num_trans: | 9 |
All_trans: | ENST00000493409.5:0 NM_001284242:0 uc057upe.1:0 ENST00000494586.5:-217 uc057upd.1:-217 ENST00000543283.2:-225 NM_001284243:-225 uc010qme.2:-225 AK294321:-225 |
TATA-Box annotation
Distance to TSS: | -8 |
---|---|
Nearest PromoterID: | NM_001284242 |
Entrez ID: | 54462 |
Nearest Unigene: | Hs.461988 |
Nearest Refseq: | NM_018999 |
Nearest Ensembl: | ENSG00000107771 |
Gene Name: | coiled-coil serine rich protein 2 |
Gene Alias: | FAM190B |
Gene Description: | coiled-coil serine rich protein 2 |
Gene Type: | protein-coding |
CpG%: | 0.015 |
GC%: | 0.353234 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |