Difference between revisions of "TSS:Hg 105998.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.145 |distance_to_tss=-30 |entrez_id=657 |gc_percent=0.791045 |gene_alias=10q23del|ACVRLK3|ALK3|CD292|SKR5 |gene_description=bone morphogenetic prote...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ACVRLK3= | ||
| + | |ALK3= | ||
| + | |CD292= | ||
| + | |SKR5= | ||
| + | |all_trans=NM_004329:5 ENST00000372037.7:16 uc001kdy.4:16 BC028383:16 AK291764:136 Z22535:244 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| + | |distance=5 | ||
|distance_to_tss=-30 | |distance_to_tss=-30 | ||
| + | |end=86756634 | ||
|entrez_id=657 | |entrez_id=657 | ||
|gc_percent=0.791045 | |gc_percent=0.791045 | ||
|gene_alias=10q23del|ACVRLK3|ALK3|CD292|SKR5 | |gene_alias=10q23del|ACVRLK3|ALK3|CD292|SKR5 | ||
|gene_description=bone morphogenetic protein receptor type 1A | |gene_description=bone morphogenetic protein receptor type 1A | ||
| − | |gene_name=BMPR1A | + | |gene_id=657 |
| + | |gene_name=bone morphogenetic protein receptor type 1A | ||
| + | |gene_source=HGNC:1076 | ||
| + | |gene_symbol=BMPR1A | ||
| + | |gene_synonyms=ALK3 CD292 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:1076 | ||
|nearest_ensembl=ENSG00000107779 | |nearest_ensembl=ENSG00000107779 | ||
|nearest_promoter_id=NM_004329 | |nearest_promoter_id=NM_004329 | ||
|nearest_refseq=NM_004329 | |nearest_refseq=NM_004329 | ||
|nearest_unigene=Hs.524477 | |nearest_unigene=Hs.524477 | ||
| + | |num_trans=6 | ||
| + | |species=human | ||
| + | |start=86756584 | ||
| + | |strand=+ | ||
| + | |transcript_name=NM_004329 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105998.1 | |tss_id=hg_105998.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=P36894 | ||
}} | }} | ||
Revision as of 21:59, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_004329 |
|---|---|
| Distance: | 5 |
| Num_trans: | 6 |
| All_trans: | NM_004329:5 ENST00000372037.7:16 uc001kdy.4:16 BC028383:16 AK291764:136 Z22535:244 |
TATA-Box annotation
| Distance to TSS: | -30 |
|---|---|
| Nearest PromoterID: | NM_004329 |
| Entrez ID: | 657 |
| Nearest Unigene: | Hs.524477 |
| Nearest Refseq: | NM_004329 |
| Nearest Ensembl: | ENSG00000107779 |
| Gene Name: | bone morphogenetic protein receptor type 1A |
| Gene Alias: | 10q23del |
| Gene Description: | bone morphogenetic protein receptor type 1A |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.791045 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
