Difference between revisions of "TSS:Hg 106000.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.15 |distance_to_tss=130 |entrez_id=657 |gc_percent=0.756219 |gene_alias=10q23del|ACVRLK3|ALK3|CD292|SKR5 |gene_description=bone morphogenetic protei...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ACVRLK3= | ||
| + | |ALK3= | ||
| + | |CD292= | ||
| + | |SKR5= | ||
| + | |all_trans=AK291764:0 Z22535:102 ENST00000372037.7:-113 uc001kdy.4:-113 BC028383:-113 NM_004329:-124 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
| + | |distance=0 | ||
|distance_to_tss=130 | |distance_to_tss=130 | ||
| + | |end=86756776 | ||
|entrez_id=657 | |entrez_id=657 | ||
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
|gene_alias=10q23del|ACVRLK3|ALK3|CD292|SKR5 | |gene_alias=10q23del|ACVRLK3|ALK3|CD292|SKR5 | ||
|gene_description=bone morphogenetic protein receptor type 1A | |gene_description=bone morphogenetic protein receptor type 1A | ||
| − | |gene_name=BMPR1A | + | |gene_id=657 |
| + | |gene_name=bone morphogenetic protein receptor type 1A | ||
| + | |gene_source=HGNC:1076 | ||
| + | |gene_symbol=BMPR1A | ||
| + | |gene_synonyms=ALK3 CD292 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:1076 | ||
|nearest_ensembl=ENSG00000107779 | |nearest_ensembl=ENSG00000107779 | ||
|nearest_promoter_id=NM_004329 | |nearest_promoter_id=NM_004329 | ||
|nearest_refseq=NM_004329 | |nearest_refseq=NM_004329 | ||
|nearest_unigene=Hs.524477 | |nearest_unigene=Hs.524477 | ||
| + | |num_trans=6 | ||
| + | |species=human | ||
| + | |start=86756762 | ||
| + | |strand=+ | ||
| + | |transcript_name=AK291764 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_106000.1 | |tss_id=hg_106000.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:59, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK291764 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | AK291764:0 Z22535:102 ENST00000372037.7:-113 uc001kdy.4:-113 BC028383:-113 NM_004329:-124 |
TATA-Box annotation
| Distance to TSS: | 130 |
|---|---|
| Nearest PromoterID: | NM_004329 |
| Entrez ID: | 657 |
| Nearest Unigene: | Hs.524477 |
| Nearest Refseq: | NM_004329 |
| Nearest Ensembl: | ENSG00000107779 |
| Gene Name: | bone morphogenetic protein receptor type 1A |
| Gene Alias: | 10q23del |
| Gene Description: | bone morphogenetic protein receptor type 1A |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
