Difference between revisions of "TSS:Hg 106009.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=811 |entrez_id=6623 |gc_percent=0.636816 |gene_alias=BCSG1|SR |gene_description=synuclein gamma |gene_name=SNCG |gene_type=prot...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |SR= | ||
| + | |all_trans=ENST00000483064.1:29 uc057uqv.1:29 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=29 | ||
|distance_to_tss=811 | |distance_to_tss=811 | ||
| + | |end=86959346 | ||
|entrez_id=6623 | |entrez_id=6623 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
|gene_alias=BCSG1|SR | |gene_alias=BCSG1|SR | ||
|gene_description=synuclein gamma | |gene_description=synuclein gamma | ||
| − | |gene_name=SNCG | + | |gene_id=6623 |
| + | |gene_name=synuclein gamma | ||
| + | |gene_source=HGNC:11141 | ||
| + | |gene_symbol=SNCG | ||
| + | |gene_synonyms=BCSG1 SR persyn | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:11141 | ||
|nearest_ensembl=ENSG00000173267 | |nearest_ensembl=ENSG00000173267 | ||
|nearest_promoter_id=NM_003087 | |nearest_promoter_id=NM_003087 | ||
|nearest_refseq=NM_003087 | |nearest_refseq=NM_003087 | ||
|nearest_unigene=Hs.349470 | |nearest_unigene=Hs.349470 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=86959337 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000483064.1 uc057uqv.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_106009.1 | |tss_id=hg_106009.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 22:00, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000483064.1 uc057uqv.1 |
|---|---|
| Distance: | 29 |
| Num_trans: | 2 |
| All_trans: | ENST00000483064.1:29 uc057uqv.1:29 |
TATA-Box annotation
| Distance to TSS: | 811 |
|---|---|
| Nearest PromoterID: | NM_003087 |
| Entrez ID: | 6623 |
| Nearest Unigene: | Hs.349470 |
| Nearest Refseq: | NM_003087 |
| Nearest Ensembl: | ENSG00000173267 |
| Gene Name: | synuclein gamma |
| Gene Alias: | BCSG1 |
| Gene Description: | synuclein gamma |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
