Difference between revisions of "TSS:Hg 106012.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.075 |distance_to_tss=50 |entrez_id=10974 |gc_percent=0.656716 |gene_alias=AFRO|APM2|C10orf116|apM-2 |gene_description=adipogenesis regulatory factor...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |APM2= | ||
| + | |C10orf116= | ||
| + | |all_trans=AK304688:0 AK312031:0 ENST00000561504.1:2 uc057urb.1:2 BC004471:12 D45370:26 ENST00000416348.1:-42 uc057ura.1:-42 NM_006829:-43 KJ898323:56 ENST00000372013.7:-282 uc001ked.3:-282 | ||
| + | |apM-2= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| + | |distance=0 | ||
|distance_to_tss=50 | |distance_to_tss=50 | ||
| + | |end=86968488 | ||
|entrez_id=10974 | |entrez_id=10974 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
|gene_alias=AFRO|APM2|C10orf116|apM-2 | |gene_alias=AFRO|APM2|C10orf116|apM-2 | ||
|gene_description=adipogenesis regulatory factor | |gene_description=adipogenesis regulatory factor | ||
| − | |gene_name=ADIRF | + | |gene_id=10974 |
| + | |gene_name=adipogenesis regulatory factor | ||
| + | |gene_source=HGNC:24043 | ||
| + | |gene_symbol=ADIRF | ||
| + | |gene_synonyms=AFRO APM2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:24043 | ||
|nearest_ensembl=ENSG00000148671 | |nearest_ensembl=ENSG00000148671 | ||
|nearest_promoter_id=NM_006829 | |nearest_promoter_id=NM_006829 | ||
|nearest_refseq=NM_006829 | |nearest_refseq=NM_006829 | ||
|nearest_unigene=Hs.642660 | |nearest_unigene=Hs.642660 | ||
| + | |num_trans=12 | ||
| + | |species=human | ||
| + | |start=86968473 | ||
| + | |strand=+ | ||
|tata_box="-34(CGCCTTAAAAAC,-,0.00),-32(CCTTAAAAACCG,+,0.00)" | |tata_box="-34(CGCCTTAAAAAC,-,0.00),-32(CCTTAAAAACCG,+,0.00)" | ||
| + | |transcript_name=AK304688 AK312031 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_106012.1 | |tss_id=hg_106012.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 22:00, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK304688 AK312031 |
|---|---|
| Distance: | 0 |
| Num_trans: | 12 |
| All_trans: | AK304688:0 AK312031:0 ENST00000561504.1:2 uc057urb.1:2 BC004471:12 D45370:26 ENST00000416348.1:-42 uc057ura.1:-42 NM_006829:-43 KJ898323:56 ENST00000372013.7:-282 uc001ked.3:-282 |
TATA-Box annotation
| Distance to TSS: | 50 |
|---|---|
| Nearest PromoterID: | NM_006829 |
| Entrez ID: | 10974 |
| Nearest Unigene: | Hs.642660 |
| Nearest Refseq: | NM_006829 |
| Nearest Ensembl: | ENSG00000148671 |
| Gene Name: | adipogenesis regulatory factor |
| Gene Alias: | AFRO |
| Gene Description: | adipogenesis regulatory factor |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-34(CGCCTTAAAAAC,-,0.00),-32(CCTTAAAAACCG,+,0.00)" |
