Difference between revisions of "TSS:Hg 106019.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.1 |distance_to_tss=3 |entrez_id=54537 |gc_percent=0.776119 |gene_alias=FAM35A1|bA163M19.1 |gene_description=family with sequence similarity 35 membe...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000298784.5:0 ENST00000298786.4:0 NM_019054:0 uc001kei.5:0 uc001kej.5:0 AK022978:0 | ||
| + | |bA163M19.1= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| + | |distance=0 | ||
|distance_to_tss=3 | |distance_to_tss=3 | ||
| + | |end=87095228 | ||
|entrez_id=54537 | |entrez_id=54537 | ||
|gc_percent=0.776119 | |gc_percent=0.776119 | ||
|gene_alias=FAM35A1|bA163M19.1 | |gene_alias=FAM35A1|bA163M19.1 | ||
|gene_description=family with sequence similarity 35 member A | |gene_description=family with sequence similarity 35 member A | ||
| − | |gene_name=FAM35A | + | |gene_id=54537 |
| + | |gene_name=family with sequence similarity 35 member A | ||
| + | |gene_source=HGNC:28773 | ||
| + | |gene_symbol=FAM35A | ||
| + | |gene_synonyms=FAM35A1 MGC5560 bA163M19.1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:28773 | ||
|nearest_ensembl=ENSG00000122376 | |nearest_ensembl=ENSG00000122376 | ||
|nearest_promoter_id=NM_019054 | |nearest_promoter_id=NM_019054 | ||
|nearest_refseq=NM_019054 | |nearest_refseq=NM_019054 | ||
|nearest_unigene=Hs.500419 | |nearest_unigene=Hs.500419 | ||
| + | |num_trans=6 | ||
| + | |species=human | ||
| + | |start=87095169 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000298784.5 ENST00000298786.4 NM_019054 uc001kei.5 uc001kej.5 AK022978 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_106019.1 | |tss_id=hg_106019.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q86V20 | ||
}} | }} | ||
Revision as of 22:00, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000298784.5 ENST00000298786.4 NM_019054 uc001kei.5 uc001kej.5 AK022978 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | ENST00000298784.5:0 ENST00000298786.4:0 NM_019054:0 uc001kei.5:0 uc001kej.5:0 AK022978:0 |
TATA-Box annotation
| Distance to TSS: | 3 |
|---|---|
| Nearest PromoterID: | NM_019054 |
| Entrez ID: | 54537 |
| Nearest Unigene: | Hs.500419 |
| Nearest Refseq: | NM_019054 |
| Nearest Ensembl: | ENSG00000122376 |
| Gene Name: | family with sequence similarity 35 member A |
| Gene Alias: | FAM35A1 |
| Gene Description: | family with sequence similarity 35 member A |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.776119 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
