Difference between revisions of "TSS:Hg 106030.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.115 |distance_to_tss=11 |entrez_id=142913 |gc_percent=0.656716 |gene_alias=CFLP1 |gene_description=cofilin 1 pseudogene 1 |gene_name=CFL1P1 |gene_ty...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000438248.1:0 NR_028492:0 BC031631:0 ENST00000415212.1:83 ENST00000456375.1:-378 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| + | |distance=0 | ||
|distance_to_tss=11 | |distance_to_tss=11 | ||
| + | |end=87818342 | ||
|entrez_id=142913 | |entrez_id=142913 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
|gene_alias=CFLP1 | |gene_alias=CFLP1 | ||
|gene_description=cofilin 1 pseudogene 1 | |gene_description=cofilin 1 pseudogene 1 | ||
| − | |gene_name=CFL1P1 | + | |gene_id=142913 |
| + | |gene_name=cofilin 1 pseudogene 1 | ||
| + | |gene_source=HGNC:28560 | ||
| + | |gene_symbol=CFL1P1 | ||
| + | |gene_synonyms=MGC35136 | ||
|gene_type=pseudo | |gene_type=pseudo | ||
| + | |hgnc_mgi_id=HGNC:28560 | ||
|nearest_ensembl=ENSG00000223820 | |nearest_ensembl=ENSG00000223820 | ||
|nearest_promoter_id=NR_028492 | |nearest_promoter_id=NR_028492 | ||
|nearest_refseq=NR_028492 | |nearest_refseq=NR_028492 | ||
|nearest_unigene=Hs.369431 | |nearest_unigene=Hs.369431 | ||
| + | |num_trans=5 | ||
| + | |species=human | ||
| + | |start=87818305 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000438248.1 NR_028492 BC031631 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_106030.1 | |tss_id=hg_106030.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 22:01, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000438248.1 NR_028492 BC031631 |
|---|---|
| Distance: | 0 |
| Num_trans: | 5 |
| All_trans: | ENST00000438248.1:0 NR_028492:0 BC031631:0 ENST00000415212.1:83 ENST00000456375.1:-378 |
TATA-Box annotation
| Distance to TSS: | 11 |
|---|---|
| Nearest PromoterID: | NR_028492 |
| Entrez ID: | 142913 |
| Nearest Unigene: | Hs.369431 |
| Nearest Refseq: | NR_028492 |
| Nearest Ensembl: | ENSG00000223820 |
| Gene Name: | cofilin 1 pseudogene 1 |
| Gene Alias: | CFLP1 |
| Gene Description: | cofilin 1 pseudogene 1 |
| Gene Type: | pseudo |
| CpG%: | 0.115 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
