Difference between revisions of "TSS:Hg 106052.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=201773 |entrez_id=5728 |gc_percent=0.452736 |gene_alias=10q23del|BZS|CWS1|DEC|GLM2|MHAM|MMAC1|PTEN1|TEP1 |gene_description=phos...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |BZS= | ||
| + | |CWS1= | ||
| + | |DEC= | ||
| + | |GLM2= | ||
| + | |MHAM= | ||
| + | |MMAC1= | ||
| + | |PTEN1= | ||
| + | |TEP1= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| + | |distance= | ||
|distance_to_tss=201773 | |distance_to_tss=201773 | ||
| + | |end=88065215 | ||
|entrez_id=5728 | |entrez_id=5728 | ||
|gc_percent=0.452736 | |gc_percent=0.452736 | ||
| Line 12: | Line 23: | ||
|nearest_refseq=NM_000314 | |nearest_refseq=NM_000314 | ||
|nearest_unigene=Hs.500466 | |nearest_unigene=Hs.500466 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=88065206 | ||
| + | |strand=+ | ||
|tata_box="29(CCCTTTAAGTGG,-,0.00)" | |tata_box="29(CCCTTTAAGTGG,-,0.00)" | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_106052.1 | |tss_id=hg_106052.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 22:02, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 201773 |
|---|---|
| Nearest PromoterID: | NM_000314 |
| Entrez ID: | 5728 |
| Nearest Unigene: | Hs.500466 |
| Nearest Refseq: | NM_000314 |
| Nearest Ensembl: | ENSG00000171862 |
| Gene Name: | PTEN |
| Gene Alias: | 10q23del |
| Gene Description: | phosphatase and tensin homolog |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.452736 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "29(CCCTTTAAGTGG,-,0.00)" |
