Difference between revisions of "TSS:Hg 106271.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.05 |distance_to_tss=-464 |entrez_id=340665 |gc_percent=0.542289 |gene_alias=FFDD4 |gene_description=cytochrome P450 family 26 subfamily C member 1 |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000624358.3:4 uc009xud.4:4 AK131099:4 BC169250:452 ENST00000285949.5:460 NM_183374:460 uc010qns.2:460 AY356349:460 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| + | |distance=4 | ||
|distance_to_tss=-464 | |distance_to_tss=-464 | ||
| + | |end=93060804 | ||
|entrez_id=340665 | |entrez_id=340665 | ||
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
|gene_alias=FFDD4 | |gene_alias=FFDD4 | ||
|gene_description=cytochrome P450 family 26 subfamily C member 1 | |gene_description=cytochrome P450 family 26 subfamily C member 1 | ||
| − | |gene_name=CYP26C1 | + | |gene_id=340665 |
| + | |gene_name=cytochrome P450 family 26 subfamily C member 1 | ||
| + | |gene_source=HGNC:20577 | ||
| + | |gene_symbol=CYP26C1 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:20577 | ||
|nearest_ensembl=ENSG00000187553 | |nearest_ensembl=ENSG00000187553 | ||
|nearest_promoter_id=NM_183374 | |nearest_promoter_id=NM_183374 | ||
|nearest_refseq=NM_183374 | |nearest_refseq=NM_183374 | ||
|nearest_unigene=Hs.369993 | |nearest_unigene=Hs.369993 | ||
| + | |num_trans=8 | ||
| + | |species=human | ||
| + | |start=93060795 | ||
| + | |strand=+ | ||
|tata_box="-34(ATCTATATAAAC,-,0.00)" | |tata_box="-34(ATCTATATAAAC,-,0.00)" | ||
| + | |transcript_name=ENST00000624358.3 uc009xud.4 AK131099 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_106271.1 | |tss_id=hg_106271.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A096LNL5 Q6ZNJ6 | ||
}} | }} | ||
Revision as of 22:11, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000624358.3 uc009xud.4 AK131099 |
|---|---|
| Distance: | 4 |
| Num_trans: | 8 |
| All_trans: | ENST00000624358.3:4 uc009xud.4:4 AK131099:4 BC169250:452 ENST00000285949.5:460 NM_183374:460 uc010qns.2:460 AY356349:460 |
TATA-Box annotation
| Distance to TSS: | -464 |
|---|---|
| Nearest PromoterID: | NM_183374 |
| Entrez ID: | 340665 |
| Nearest Unigene: | Hs.369993 |
| Nearest Refseq: | NM_183374 |
| Nearest Ensembl: | ENSG00000187553 |
| Gene Name: | cytochrome P450 family 26 subfamily C member 1 |
| Gene Alias: | FFDD4 |
| Gene Description: | cytochrome P450 family 26 subfamily C member 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-34(ATCTATATAAAC,-,0.00)" |
