Difference between revisions of "TSS:Hg 10642.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.135 |distance_to_tss=55 |entrez_id=23352 |gc_percent=0.741294 |gene_alias=RBAF600|ZUBR1|p600 |gene_description=ubiquitin protein ligase E3 component...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ZUBR1= | ||
| + | |all_trans=AF348492:-47 NM_020765:-51 BC041137:-55 ENST00000375254.7:-75 uc001bbi.4:-75 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
| + | |distance=-47 | ||
|distance_to_tss=55 | |distance_to_tss=55 | ||
| + | |end=19210201 | ||
|entrez_id=23352 | |entrez_id=23352 | ||
|gc_percent=0.741294 | |gc_percent=0.741294 | ||
|gene_alias=RBAF600|ZUBR1|p600 | |gene_alias=RBAF600|ZUBR1|p600 | ||
|gene_description=ubiquitin protein ligase E3 component n-recognin 4 | |gene_description=ubiquitin protein ligase E3 component n-recognin 4 | ||
| − | |gene_name=UBR4 | + | |gene_id=23352 |
| + | |gene_name=ubiquitin protein ligase E3 component n-recognin 4 | ||
| + | |gene_source=HGNC:30313 | ||
| + | |gene_symbol=UBR4 | ||
| + | |gene_synonyms=KIAA0462 KIAA1307 RBAF600 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:30313 | ||
|nearest_ensembl=ENSG00000127481 | |nearest_ensembl=ENSG00000127481 | ||
|nearest_promoter_id=NM_020765 | |nearest_promoter_id=NM_020765 | ||
|nearest_refseq=NM_020765 | |nearest_refseq=NM_020765 | ||
|nearest_unigene=Hs.148078 | |nearest_unigene=Hs.148078 | ||
| + | |num_trans=5 | ||
| + | |p600= | ||
| + | |species=human | ||
| + | |start=19210193 | ||
| + | |strand=- | ||
| + | |transcript_name=AF348492 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10642.1 | |tss_id=hg_10642.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 22:17, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AF348492 |
|---|---|
| Distance: | -47 |
| Num_trans: | 5 |
| All_trans: | AF348492:-47 NM_020765:-51 BC041137:-55 ENST00000375254.7:-75 uc001bbi.4:-75 |
TATA-Box annotation
| Distance to TSS: | 55 |
|---|---|
| Nearest PromoterID: | NM_020765 |
| Entrez ID: | 23352 |
| Nearest Unigene: | Hs.148078 |
| Nearest Refseq: | NM_020765 |
| Nearest Ensembl: | ENSG00000127481 |
| Gene Name: | ubiquitin protein ligase E3 component n-recognin 4 |
| Gene Alias: | RBAF600 |
| Gene Description: | ubiquitin protein ligase E3 component n-recognin 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.741294 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
