Difference between revisions of "TSS:Hg 106453.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=4 |entrez_id=414157 |gc_percent=0.621891 |gene_alias=bA548K23.1 |gene_description=chromosome 10 open reading frame 62 |gene_nam...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=NM_001009997:-1 ENST00000370640.4:26 uc001koa.4:26 BC037252:26 AM393183:-96 AM393504:-96 AM393165:-96 AM393792:-96 AM393789:196 AM393790:196 AM392556:196 AM392795:196 AB464495:196 KJ900755:196 BC043281:-447 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=-1 | ||
|distance_to_tss=4 | |distance_to_tss=4 | ||
| + | |end=97589701 | ||
|entrez_id=414157 | |entrez_id=414157 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
|gene_alias=bA548K23.1 | |gene_alias=bA548K23.1 | ||
|gene_description=chromosome 10 open reading frame 62 | |gene_description=chromosome 10 open reading frame 62 | ||
| − | |gene_name=C10orf62 | + | |gene_id=414157 |
| + | |gene_name=chromosome 10 open reading frame 62 | ||
| + | |gene_source=HGNC:23294 | ||
| + | |gene_symbol=C10orf62 | ||
| + | |gene_synonyms=bA548K23.1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23294 | ||
|nearest_ensembl=ENSG00000203942 | |nearest_ensembl=ENSG00000203942 | ||
|nearest_promoter_id=NM_001009997 | |nearest_promoter_id=NM_001009997 | ||
|nearest_refseq=NM_001009997 | |nearest_refseq=NM_001009997 | ||
|nearest_unigene=Hs.662302 | |nearest_unigene=Hs.662302 | ||
| + | |num_trans=15 | ||
| + | |species=human | ||
| + | |start=97589693 | ||
| + | |strand=+ | ||
| + | |transcript_name=NM_001009997 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_106453.1 | |tss_id=hg_106453.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5T681 | ||
}} | }} | ||
Revision as of 22:19, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001009997 |
|---|---|
| Distance: | -1 |
| Num_trans: | 15 |
| All_trans: | NM_001009997:-1 ENST00000370640.4:26 uc001koa.4:26 BC037252:26 AM393183:-96 AM393504:-96 AM393165:-96 AM393792:-96 AM393789:196 AM393790:196 AM392556:196 AM392795:196 AB464495:196 KJ900755:196 BC043281:-447 |
TATA-Box annotation
| Distance to TSS: | 4 |
|---|---|
| Nearest PromoterID: | NM_001009997 |
| Entrez ID: | 414157 |
| Nearest Unigene: | Hs.662302 |
| Nearest Refseq: | NM_001009997 |
| Nearest Ensembl: | ENSG00000203942 |
| Gene Name: | chromosome 10 open reading frame 62 |
| Gene Alias: | bA548K23.1 |
| Gene Description: | chromosome 10 open reading frame 62 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
