Difference between revisions of "TSS:Hg 106462.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.14 |distance_to_tss=242 |entrez_id=83742 |gc_percent=0.791045 |gene_alias=GB14|MARVD1|MRVLDC1|bA548K23.8 |gene_description=MARVEL domain containing...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |MARVD1= | ||
| + | |MRVLDC1= | ||
| + | |all_trans=AK025996:67 AF325259:-219 ENST00000285605.7:-220 uc001koj.5:-220 BC004995:-220 BC062544:-222 NM_031484:-236 ENST00000434038.6:-427 uc057vgg.1:-427 | ||
| + | |bA548K23.8= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
| + | |distance=67 | ||
|distance_to_tss=242 | |distance_to_tss=242 | ||
| + | |end=97713956 | ||
|entrez_id=83742 | |entrez_id=83742 | ||
|gc_percent=0.791045 | |gc_percent=0.791045 | ||
|gene_alias=GB14|MARVD1|MRVLDC1|bA548K23.8 | |gene_alias=GB14|MARVD1|MRVLDC1|bA548K23.8 | ||
|gene_description=MARVEL domain containing 1 | |gene_description=MARVEL domain containing 1 | ||
| − | |gene_name=MARVELD1 | + | |gene_id=83742 |
| + | |gene_name=MARVEL domain containing 1 | ||
| + | |gene_source=HGNC:28674 | ||
| + | |gene_symbol=MARVELD1 | ||
| + | |gene_synonyms=FLJ22343 FLJ23440 GB14 MGC4415 bA548K23.8 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:28674 | ||
|nearest_ensembl=ENSG00000155254 | |nearest_ensembl=ENSG00000155254 | ||
|nearest_promoter_id=NM_031484 | |nearest_promoter_id=NM_031484 | ||
|nearest_refseq=NM_031484 | |nearest_refseq=NM_031484 | ||
|nearest_unigene=Hs.744073 | |nearest_unigene=Hs.744073 | ||
| + | |num_trans=9 | ||
| + | |species=human | ||
| + | |start=97713943 | ||
| + | |strand=+ | ||
| + | |transcript_name=AK025996 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_106462.1 | |tss_id=hg_106462.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 22:19, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK025996 |
|---|---|
| Distance: | 67 |
| Num_trans: | 9 |
| All_trans: | AK025996:67 AF325259:-219 ENST00000285605.7:-220 uc001koj.5:-220 BC004995:-220 BC062544:-222 NM_031484:-236 ENST00000434038.6:-427 uc057vgg.1:-427 |
TATA-Box annotation
| Distance to TSS: | 242 |
|---|---|
| Nearest PromoterID: | NM_031484 |
| Entrez ID: | 83742 |
| Nearest Unigene: | Hs.744073 |
| Nearest Refseq: | NM_031484 |
| Nearest Ensembl: | ENSG00000155254 |
| Gene Name: | MARVEL domain containing 1 |
| Gene Alias: | GB14 |
| Gene Description: | MARVEL domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.791045 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
