Difference between revisions of "TSS:Hg 106506.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=67 |entrez_id=1244 |gc_percent=0.432836 |gene_alias=ABC30|CMOAT|DJS|MRP2|cMRP |gene_description=ATP binding cassette subfamily C...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CMOAT= | ||
| + | |DJS= | ||
| + | |MRP2= | ||
| + | |all_trans=ENST00000370449.8:61 NM_000392:-61 uc001kqf.3:61 U49248:75 ENST00000370434.1:92 uc057vii.1:92 U66683:92 X96395:137 BC136419:145 U63970:145 | ||
| + | |cMRP= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance=61 | ||
|distance_to_tss=67 | |distance_to_tss=67 | ||
| + | |end=99782671 | ||
|entrez_id=1244 | |entrez_id=1244 | ||
|gc_percent=0.432836 | |gc_percent=0.432836 | ||
|gene_alias=ABC30|CMOAT|DJS|MRP2|cMRP | |gene_alias=ABC30|CMOAT|DJS|MRP2|cMRP | ||
|gene_description=ATP binding cassette subfamily C member 2 | |gene_description=ATP binding cassette subfamily C member 2 | ||
| − | |gene_name=ABCC2 | + | |gene_id=1244 |
| + | |gene_name=ATP binding cassette subfamily C member 2 | ||
| + | |gene_source=HGNC:53 | ||
| + | |gene_symbol=ABCC2 | ||
| + | |gene_synonyms=DJS MRP2 cMRP | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:53 | ||
|nearest_ensembl=ENSG00000023839 | |nearest_ensembl=ENSG00000023839 | ||
|nearest_promoter_id=NM_000392 | |nearest_promoter_id=NM_000392 | ||
|nearest_refseq=NM_000392 | |nearest_refseq=NM_000392 | ||
|nearest_unigene=Hs.368243 | |nearest_unigene=Hs.368243 | ||
| + | |num_trans=10 | ||
| + | |species=human | ||
| + | |start=99782658 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000370449.8 uc001kqf.3 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_106506.1 | |tss_id=hg_106506.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q92887 | ||
}} | }} | ||
Revision as of 22:21, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000370449.8 uc001kqf.3 |
|---|---|
| Distance: | 61 |
| Num_trans: | 10 |
| All_trans: | ENST00000370449.8:61 NM_000392:-61 uc001kqf.3:61 U49248:75 ENST00000370434.1:92 uc057vii.1:92 U66683:92 X96395:137 BC136419:145 U63970:145 |
TATA-Box annotation
| Distance to TSS: | 67 |
|---|---|
| Nearest PromoterID: | NM_000392 |
| Entrez ID: | 1244 |
| Nearest Unigene: | Hs.368243 |
| Nearest Refseq: | NM_000392 |
| Nearest Ensembl: | ENSG00000023839 |
| Gene Name: | ATP binding cassette subfamily C member 2 |
| Gene Alias: | ABC30 |
| Gene Description: | ATP binding cassette subfamily C member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.432836 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
