Difference between revisions of "TSS:Hg 106654.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.07 |distance_to_tss=2 |entrez_id=3195 |gc_percent=0.61194 |gene_alias=HOX11|TCL3 |gene_description=T-cell leukemia homeobox 1 |gene_name=TLX1 |gene_...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |TCL3= | ||
| + | |all_trans=ENST00000467928.2:0 NM_001195517:0 NM_005521:0 uc021pxd.2:0 BC130530:0 S38742:123 M75952:209 AB464289:220 ENST00000463716.3:407 uc057vmm.1:407 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| + | |distance=0 | ||
|distance_to_tss=2 | |distance_to_tss=2 | ||
| + | |end=101131321 | ||
|entrez_id=3195 | |entrez_id=3195 | ||
|gc_percent=0.61194 | |gc_percent=0.61194 | ||
|gene_alias=HOX11|TCL3 | |gene_alias=HOX11|TCL3 | ||
|gene_description=T-cell leukemia homeobox 1 | |gene_description=T-cell leukemia homeobox 1 | ||
| − | |gene_name=TLX1 | + | |gene_id=3195 |
| + | |gene_name=T-cell leukemia homeobox 1 | ||
| + | |gene_source=HGNC:5056 | ||
| + | |gene_symbol=TLX1 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:5056 | ||
|nearest_ensembl=ENSG00000107807 | |nearest_ensembl=ENSG00000107807 | ||
|nearest_promoter_id=NM_001195517 | |nearest_promoter_id=NM_001195517 | ||
|nearest_refseq=NM_005521 | |nearest_refseq=NM_005521 | ||
|nearest_unigene=Hs.89583 | |nearest_unigene=Hs.89583 | ||
| + | |num_trans=10 | ||
| + | |species=human | ||
| + | |start=101131291 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000467928.2 NM_001195517 NM_005521 uc021pxd.2 BC130530 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_106654.1 | |tss_id=hg_106654.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=P31314 | ||
}} | }} | ||
Revision as of 22:27, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000467928.2 NM_001195517 NM_005521 uc021pxd.2 BC130530 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10 |
| All_trans: | ENST00000467928.2:0 NM_001195517:0 NM_005521:0 uc021pxd.2:0 BC130530:0 S38742:123 M75952:209 AB464289:220 ENST00000463716.3:407 uc057vmm.1:407 |
TATA-Box annotation
| Distance to TSS: | 2 |
|---|---|
| Nearest PromoterID: | NM_001195517 |
| Entrez ID: | 3195 |
| Nearest Unigene: | Hs.89583 |
| Nearest Refseq: | NM_005521 |
| Nearest Ensembl: | ENSG00000107807 |
| Gene Name: | T-cell leukemia homeobox 1 |
| Gene Alias: | HOX11 |
| Gene Description: | T-cell leukemia homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
