Difference between revisions of "TSS:Hg 10677.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.125 |distance_to_tss=157 |entrez_id=832 |gc_percent=0.79602 |gene_alias=CAPB|CAPPB|CAPZ |gene_description=capping actin protein of muscle Z-line bet...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CAPPB= | ||
| + | |CAPZ= | ||
| + | |all_trans=ENST00000375142.5:0 ENST00000264202.7:0 ENST00000482808.1:0 uc021ohr.3:0 uc001bce.5:0 uc057cwx.1:0 BC107752:0 AK313113:0 ENST00000264203.7:-13 uc009vpk.5:-13 AK125085:-13 ENST00000459967.6:-39 uc057cwu.1:-39 NM_001206541:-141 NM_004930:-141 NM_001206540:-141 NM_001313932:-141 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| + | |distance=0 | ||
|distance_to_tss=157 | |distance_to_tss=157 | ||
| + | |end=19485500 | ||
|entrez_id=832 | |entrez_id=832 | ||
|gc_percent=0.79602 | |gc_percent=0.79602 | ||
|gene_alias=CAPB|CAPPB|CAPZ | |gene_alias=CAPB|CAPPB|CAPZ | ||
|gene_description=capping actin protein of muscle Z-line beta subunit | |gene_description=capping actin protein of muscle Z-line beta subunit | ||
| − | |gene_name=CAPZB | + | |gene_id=832 |
| + | |gene_name=capping actin protein of muscle Z-line beta subunit | ||
| + | |gene_source=HGNC:1491 | ||
| + | |gene_symbol=CAPZB | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:1491 | ||
|nearest_ensembl=ENSG00000077549 | |nearest_ensembl=ENSG00000077549 | ||
|nearest_promoter_id=NM_001206540 | |nearest_promoter_id=NM_001206540 | ||
|nearest_refseq=NM_004930 | |nearest_refseq=NM_004930 | ||
|nearest_unigene=Hs.432760 | |nearest_unigene=Hs.432760 | ||
| + | |num_trans=17 | ||
| + | |species=human | ||
| + | |start=19485468 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000375142.5 ENST00000264202.7 ENST00000482808.1 uc021ohr.3 uc001bce.5 uc057cwx.1 BC107752 AK313113 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10677.1 | |tss_id=hg_10677.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B2R7T8 P47756 | ||
}} | }} | ||
Revision as of 22:32, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000375142.5 ENST00000264202.7 ENST00000482808.1 uc021ohr.3 uc001bce.5 uc057cwx.1 BC107752 AK313113 |
|---|---|
| Distance: | 0 |
| Num_trans: | 17 |
| All_trans: | ENST00000375142.5:0 ENST00000264202.7:0 ENST00000482808.1:0 uc021ohr.3:0 uc001bce.5:0 uc057cwx.1:0 BC107752:0 AK313113:0 ENST00000264203.7:-13 uc009vpk.5:-13 AK125085:-13 ENST00000459967.6:-39 uc057cwu.1:-39 NM_001206541:-141 NM_004930:-141 NM_001206540:-141 NM_001313932:-141 |
TATA-Box annotation
| Distance to TSS: | 157 |
|---|---|
| Nearest PromoterID: | NM_001206540 |
| Entrez ID: | 832 |
| Nearest Unigene: | Hs.432760 |
| Nearest Refseq: | NM_004930 |
| Nearest Ensembl: | ENSG00000077549 |
| Gene Name: | capping actin protein of muscle Z-line beta subunit |
| Gene Alias: | CAPB |
| Gene Description: | capping actin protein of muscle Z-line beta subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.79602 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
