Difference between revisions of "TSS:Mm 170516.1"
From referenceTSS
m |
|||
| Line 1: | Line 1: | ||
| − | {{ | + | {{TSSDetail |
| + | |Btdc= | ||
| + | |F730015O22Rik= | ||
| + | |PD-L2= | ||
|all_trans= | |all_trans= | ||
| − | |||
|chr=chr19 | |chr=chr19 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance= | |distance= | ||
|distance_to_tss=53840 | |distance_to_tss=53840 | ||
| − | |end= | + | |end=29464762 |
|entrez_id=58205 | |entrez_id=58205 | ||
|gc_percent=0.522388 | |gc_percent=0.522388 | ||
| Line 12: | Line 14: | ||
|gene_description=programmed cell death 1 ligand 2 | |gene_description=programmed cell death 1 ligand 2 | ||
|gene_id= | |gene_id= | ||
| − | |gene_name= | + | |gene_name=Pdcd1lg2 |
|gene_source= | |gene_source= | ||
|gene_symbol= | |gene_symbol= | ||
| Line 22: | Line 24: | ||
|nearest_refseq=NM_021396 | |nearest_refseq=NM_021396 | ||
|nearest_unigene=Mm.116737 | |nearest_unigene=Mm.116737 | ||
| − | |num_trans= | + | |num_trans=0 |
| + | |peakPage= | ||
|peak_id=mm_170516.1 | |peak_id=mm_170516.1 | ||
|peak_score=1 | |peak_score=1 | ||
| − | |start= | + | |species=mouse |
| − | |strand= | + | |start=29464756 |
| + | |strand=- | ||
|tata_box="-38(CCCCTTATAAGC,-,0.00),-36(CCTTATAAGCAC,+,0.00)" | |tata_box="-38(CCCCTTATAAGC,-,0.00),-36(CCTTATAAGCAC,+,0.00)" | ||
|transcript_name= | |transcript_name= | ||
| + | |tss_classification=no | ||
| + | |tss_id=mm_170516.1 | ||
| + | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Revision as of 04:02, 18 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 53840 |
|---|---|
| Nearest PromoterID: | NM_021396 |
| Entrez ID: | 58205 |
| Nearest Unigene: | Mm.116737 |
| Nearest Refseq: | NM_021396 |
| Nearest Ensembl: | ENSMUSG00000016498 |
| Gene Name: | Pdcd1lg2 |
| Gene Alias: | B7-DC |
| Gene Description: | programmed cell death 1 ligand 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.522388 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-38(CCCCTTATAAGC,-,0.00),-36(CCTTATAAGCAC,+,0.00)" |
