Difference between revisions of "TSS:Hg 108141.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=2 |entrez_id=3559 |gc_percent=0.427861 |gene_alias=CD25|IDDM10|IL2R|IMD41|TCGFR|p55 |gene_description=interleukin 2 receptor sub...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |IDDM10= | ||
| + | |IL2R= | ||
| + | |IMD41= | ||
| + | |TCGFR= | ||
| + | |all_trans=NM_000417:0 NM_001308242:0 NM_001308243:0 AK313847:0 ENST00000379959.7:36 uc001iiz.3:36 ENST00000379954.5:52 uc009xih.3:52 X01057:52 K03122:52 AK223313:69 ENST00000256876.10:71 uc057rme.1:71 BC156627:210 BC152889:210 AB528862:210 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| + | |distance=0 | ||
|distance_to_tss=2 | |distance_to_tss=2 | ||
| + | |end=6062376 | ||
|entrez_id=3559 | |entrez_id=3559 | ||
|gc_percent=0.427861 | |gc_percent=0.427861 | ||
|gene_alias=CD25|IDDM10|IL2R|IMD41|TCGFR|p55 | |gene_alias=CD25|IDDM10|IL2R|IMD41|TCGFR|p55 | ||
|gene_description=interleukin 2 receptor subunit alpha | |gene_description=interleukin 2 receptor subunit alpha | ||
| − | |gene_name=IL2RA | + | |gene_id=3559 |
| + | |gene_name=interleukin 2 receptor subunit alpha | ||
| + | |gene_source=HGNC:6008 | ||
| + | |gene_symbol=IL2RA | ||
| + | |gene_synonyms=CD25 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:6008 | ||
|nearest_ensembl=ENSG00000134460 | |nearest_ensembl=ENSG00000134460 | ||
|nearest_promoter_id=NM_001308243 | |nearest_promoter_id=NM_001308243 | ||
|nearest_refseq=NM_000417 | |nearest_refseq=NM_000417 | ||
|nearest_unigene=Hs.231367 | |nearest_unigene=Hs.231367 | ||
| + | |num_trans=16 | ||
| + | |p55= | ||
| + | |species=human | ||
| + | |start=6062360 | ||
| + | |strand=- | ||
| + | |transcript_name=NM_000417 NM_001308242 NM_001308243 AK313847 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_108141.1 | |tss_id=hg_108141.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B2R9M9 P01589 Q5W005 | ||
}} | }} | ||
Revision as of 23:31, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_000417 NM_001308242 NM_001308243 AK313847 |
|---|---|
| Distance: | 0 |
| Num_trans: | 16 |
| All_trans: | NM_000417:0 NM_001308242:0 NM_001308243:0 AK313847:0 ENST00000379959.7:36 uc001iiz.3:36 ENST00000379954.5:52 uc009xih.3:52 X01057:52 K03122:52 AK223313:69 ENST00000256876.10:71 uc057rme.1:71 BC156627:210 BC152889:210 AB528862:210 |
TATA-Box annotation
| Distance to TSS: | 2 |
|---|---|
| Nearest PromoterID: | NM_001308243 |
| Entrez ID: | 3559 |
| Nearest Unigene: | Hs.231367 |
| Nearest Refseq: | NM_000417 |
| Nearest Ensembl: | ENSG00000134460 |
| Gene Name: | interleukin 2 receptor subunit alpha |
| Gene Alias: | CD25 |
| Gene Description: | interleukin 2 receptor subunit alpha |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.427861 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
