Difference between revisions of "TSS:Hg 108143.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=-150 |entrez_id=3559 |gc_percent=0.422886 |gene_alias=CD25|IDDM10|IL2R|IMD41|TCGFR|p55 |gene_description=interleukin 2 receptor...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |IDDM10= | ||
| + | |IL2R= | ||
| + | |IMD41= | ||
| + | |TCGFR= | ||
| + | |all_trans=NM_000417:148 NM_001308242:148 NM_001308243:148 AK313847:151 ENST00000379959.7:193 uc001iiz.3:193 ENST00000379954.5:209 uc009xih.3:209 X01057:209 K03122:209 AK223313:226 ENST00000256876.10:228 uc057rme.1:228 BC156627:367 BC152889:367 AB528862:367 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=148 | ||
|distance_to_tss=-150 | |distance_to_tss=-150 | ||
| + | |end=6062522 | ||
|entrez_id=3559 | |entrez_id=3559 | ||
|gc_percent=0.422886 | |gc_percent=0.422886 | ||
|gene_alias=CD25|IDDM10|IL2R|IMD41|TCGFR|p55 | |gene_alias=CD25|IDDM10|IL2R|IMD41|TCGFR|p55 | ||
|gene_description=interleukin 2 receptor subunit alpha | |gene_description=interleukin 2 receptor subunit alpha | ||
| − | |gene_name=IL2RA | + | |gene_id=3559 |
| + | |gene_name=interleukin 2 receptor subunit alpha | ||
| + | |gene_source=HGNC:6008 | ||
| + | |gene_symbol=IL2RA | ||
| + | |gene_synonyms=CD25 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:6008 | ||
|nearest_ensembl=ENSG00000134460 | |nearest_ensembl=ENSG00000134460 | ||
|nearest_promoter_id=NM_001308242 | |nearest_promoter_id=NM_001308242 | ||
|nearest_refseq=NM_000417 | |nearest_refseq=NM_000417 | ||
|nearest_unigene=Hs.231367 | |nearest_unigene=Hs.231367 | ||
| + | |num_trans=16 | ||
| + | |p55= | ||
| + | |species=human | ||
| + | |start=6062517 | ||
| + | |strand=- | ||
|tata_box="-44(CCTTTTATGGGC,+,0.00)" | |tata_box="-44(CCTTTTATGGGC,+,0.00)" | ||
| + | |transcript_name=NM_000417 NM_001308242 NM_001308243 | ||
| + | |tss_classification=no | ||
|tss_id=hg_108143.1 | |tss_id=hg_108143.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=P01589 Q5W005 | ||
}} | }} | ||
Revision as of 23:32, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NM_000417 NM_001308242 NM_001308243 |
|---|---|
| Distance: | 148 |
| Num_trans: | 16 |
| All_trans: | NM_000417:148 NM_001308242:148 NM_001308243:148 AK313847:151 ENST00000379959.7:193 uc001iiz.3:193 ENST00000379954.5:209 uc009xih.3:209 X01057:209 K03122:209 AK223313:226 ENST00000256876.10:228 uc057rme.1:228 BC156627:367 BC152889:367 AB528862:367 |
TATA-Box annotation
| Distance to TSS: | -150 |
|---|---|
| Nearest PromoterID: | NM_001308242 |
| Entrez ID: | 3559 |
| Nearest Unigene: | Hs.231367 |
| Nearest Refseq: | NM_000417 |
| Nearest Ensembl: | ENSG00000134460 |
| Gene Name: | interleukin 2 receptor subunit alpha |
| Gene Alias: | CD25 |
| Gene Description: | interleukin 2 receptor subunit alpha |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.422886 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-44(CCTTTTATGGGC,+,0.00)" |
